Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c20
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59Z77 Cluster: Putative uncharacterized protein; n=2; ...    34   1.9  
UniRef50_P32860 Cluster: NifU-like protein, mitochondrial precur...    33   3.3  
UniRef50_UPI000023CC88 Cluster: hypothetical protein FG06641.1; ...    33   4.4  
UniRef50_Q1GWC0 Cluster: Putative uncharacterized protein; n=1; ...    32   7.6  
UniRef50_A3ZGQ1 Cluster: Phosphomannomutase/phosphoglucomutase; ...    32   7.6  
UniRef50_Q5D6D6 Cluster: Nonribosomal peptide synthetase 3; n=3;...    32   7.6  

>UniRef50_Q59Z77 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 564

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 13/59 (22%), Positives = 33/59 (55%)
 Frame = +1

Query: 235 VVQYLVKSKAVAAAHSYCTQCTSGNQKNDSKSNYVPVIMMPIYPADQCPFDMDCEIKKM 411
           ++Q+L+K    A   S+C++ T    ++ ++   + +++   YP +  P +++ EI K+
Sbjct: 8   ILQFLIKESNNAHLKSHCSRSTLSQMESYNQQEIIRILLCERYPDNPIPEEINLEINKL 66


>UniRef50_P32860 Cluster: NifU-like protein, mitochondrial
           precursor; n=7; Saccharomycetales|Rep: NifU-like
           protein, mitochondrial precursor - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 256

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
 Frame = +1

Query: 67  IKMTDKNLI--AKLAS-VPLEKPGFDALNMTAPFMVQMNPDGK--WNSCKPENLD 216
           IK TD+NLI  +KLA  + L+ PG ++L +   F+  +N D    WNS KPE +D
Sbjct: 55  IKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLT-INKDRMVHWNSIKPEIID 108


>UniRef50_UPI000023CC88 Cluster: hypothetical protein FG06641.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG06641.1
            - Gibberella zeae PH-1
          Length = 1634

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +1

Query: 118  EKPGFDALNMTAPFMVQMNPDGKWNSCKPENLDEERLKAVVQYLVKSKAVAAAHSYCTQC 297
            +KP  +  N+TAP  ++   +       PE ++       +Q  V S+A     S  TQ 
Sbjct: 888  QKPAQEKPNVTAPKPIEPTKETPMEQAVPEKVESASAPLSIQQQVASRAAIQRKSIVTQP 947

Query: 298  TSGNQKND 321
            T+  Q+N+
Sbjct: 948  TAKPQENE 955


>UniRef50_Q1GWC0 Cluster: Putative uncharacterized protein; n=1;
           Sphingopyxis alaskensis|Rep: Putative uncharacterized
           protein - Sphingopyxis alaskensis (Sphingomonas
           alaskensis)
          Length = 273

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 184 KWNSCKPENLDEERLKAVVQY-LVKSKAVAAAHSYCTQCTSGNQKN 318
           +WNSC+   +D ++LK +V++ L +S A+A   S  T  T  N  N
Sbjct: 189 RWNSCRVSGVDVDQLKTIVKFRLTQSGALAGFTSVTT--TGENDSN 232


>UniRef50_A3ZGQ1 Cluster: Phosphomannomutase/phosphoglucomutase;
           n=16; Campylobacter|Rep:
           Phosphomannomutase/phosphoglucomutase - Campylobacter
           jejuni subsp. jejuni 84-25
          Length = 456

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +1

Query: 121 KPGFDALNMTAPFMVQMNPDGKWNSCKPENLDEERLKAVVQYLVKSKAVAAAHSY 285
           KP   ALN+ A  M    PDG++ +  P+  +EE L A+ ++L +++  + A ++
Sbjct: 186 KPLIKALNLKAHVMFA-EPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAF 239


>UniRef50_Q5D6D6 Cluster: Nonribosomal peptide synthetase 3; n=3;
            root|Rep: Nonribosomal peptide synthetase 3 -
            Cochliobolus heterostrophus (Drechslera maydis)
          Length = 5158

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 163  VQMNPDGKWNSCKPENLDEERLKAVVQYLVKSKAVAAAHSYCTQCTSGNQ 312
            +Q  PD +W   K ENLD   L+  ++ +  +  +A ++  C++   GN+
Sbjct: 4423 LQTIPDNEWTDFKEENLDRGSLQQRIKDVPSTSPMAISNIPCSKTVFGNR 4472


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,256,012
Number of Sequences: 1657284
Number of extensions: 6574462
Number of successful extensions: 18436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18432
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)