Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c19
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 349 VLPLCAVCILHER 387
           V+PLC  C LH R
Sbjct: 209 VMPLCKSCDLHHR 221


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 501 GVLQISCQRRYKPRVLFSALNTSPV*SSLDEALFSIP 391
           G L +S   +Y+PR+L    +T+         +F+ P
Sbjct: 135 GQLVLSSMHKYQPRILIVKASTAQALGWAPTNVFTFP 171


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 302 LTTNPA*IHPTIAP-HYQSITTSLPP 228
           L TNPA  HP + P  +Q+ +   PP
Sbjct: 50  LPTNPAFFHPGLLPLAWQANSPPSPP 75


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = -2

Query: 497 SYKS-PASVGTNHESYSVL*TPHLFKARSMK--PYSLSLARSCKMQTAQ 360
           +Y+S P S+G +  + S     HL +AR  +  PY  S+A +CK+ +++
Sbjct: 35  AYRSFPLSLGMSPYASSQHHHHHL-QARPPQDSPYDASVAAACKLYSSE 82


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 265 PHTINLLPPRCLPSF 221
           PH+    PPRC P +
Sbjct: 23  PHSPEPYPPRCPPIY 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,977
Number of Sequences: 336
Number of extensions: 2798
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)