Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c18
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50859-8|CAN99723.1| 549|Caenorhabditis elegans Hypothetical pr... 220 7e-58
Z50859-7|CAH04735.1| 574|Caenorhabditis elegans Hypothetical pr... 220 1e-57
Z50859-4|CAA90730.1| 538|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z50859-3|CAA90728.1| 632|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 31 1.1
Z81142-4|CAB03506.1| 338|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical ... 29 4.6
AF039051-3|AAB94261.2| 347|Caenorhabditis elegans Hypothetical ... 28 6.0
Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear recep... 28 8.0
>Z50859-8|CAN99723.1| 549|Caenorhabditis elegans Hypothetical
protein T26C5.3d protein.
Length = 549
Score = 220 bits (538), Expect = 7e-58
Identities = 104/189 (55%), Positives = 133/189 (70%)
Frame = +3
Query: 153 IMTLTKRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPML 332
++ +++ E + N + +KGD +I +LLFLY LQG+PLGL GA+P+L
Sbjct: 15 LVAASRKSTLVERRNVDPNANWFKRTHDTLKGDISSILLLLFLYLLQGVPLGLIGAIPLL 74
Query: 333 LQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIV 512
L K ++Y QA FS WPFS+KLLWAPIVD++F GRRK+W+VP QYLIG M+ +
Sbjct: 75 LSGKHVSYGSQAIFSFAYWPFSLKLLWAPIVDSVFSKRLGRRKSWMVPCQYLIGAFMLYL 134
Query: 513 SYCVTDWLGIDGEPPSMTILTVSFLLLNFLAATQDIAVDGWALTMLKRCNVGHASTCNTV 692
SY V D +G +G P++ L + FL LNFLAATQDIAVDGWALTML R NVG+ASTCN V
Sbjct: 135 SYKVNDIMGDNGGSPNVVFLMLIFLPLNFLAATQDIAVDGWALTMLSRKNVGYASTCNAV 194
Query: 693 GQTAGFFLG 719
GQTAG+FLG
Sbjct: 195 GQTAGYFLG 203
>Z50859-7|CAH04735.1| 574|Caenorhabditis elegans Hypothetical
protein T26C5.3c protein.
Length = 574
Score = 220 bits (537), Expect = 1e-57
Identities = 105/184 (57%), Positives = 131/184 (71%)
Frame = +3
Query: 168 KRKNSPENEELIENGDAPNEGRSNIKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKG 347
K K + + + N + +KGD +I +LLFLY LQG+PLGL GA+P+LL K
Sbjct: 45 KEKKVVQIQNVDPNANWFKRTHDTLKGDISSILLLLFLYLLQGVPLGLIGAIPLLLSGKH 104
Query: 348 ITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVSYCVT 527
++Y QA FS WPFS+KLLWAPIVD++F GRRK+W+VP QYLIG M+ +SY V
Sbjct: 105 VSYGSQAIFSFAYWPFSLKLLWAPIVDSVFSKRLGRRKSWMVPCQYLIGAFMLYLSYKVN 164
Query: 528 DWLGIDGEPPSMTILTVSFLLLNFLAATQDIAVDGWALTMLKRCNVGHASTCNTVGQTAG 707
D +G +G P++ L + FL LNFLAATQDIAVDGWALTML R NVG+ASTCN VGQTAG
Sbjct: 165 DIMGDNGGSPNVVFLMLIFLPLNFLAATQDIAVDGWALTMLSRKNVGYASTCNAVGQTAG 224
Query: 708 FFLG 719
+FLG
Sbjct: 225 YFLG 228
>Z50859-4|CAA90730.1| 538|Caenorhabditis elegans Hypothetical
protein T26C5.3b protein.
Length = 538
Score = 219 bits (535), Expect = 2e-57
Identities = 102/160 (63%), Positives = 124/160 (77%)
Frame = +3
Query: 240 IKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAP 419
+KGD +I +LLFLY LQG+PLGL GA+P+LL K ++Y QA FS WPFS+KLLWAP
Sbjct: 33 LKGDISSILLLLFLYLLQGVPLGLIGAIPLLLSGKHVSYGSQAIFSFAYWPFSLKLLWAP 92
Query: 420 IVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVSYCVTDWLGIDGEPPSMTILTVSFLLLNF 599
IVD++F GRRK+W+VP QYLIG M+ +SY V D +G +G P++ L + FL LNF
Sbjct: 93 IVDSVFSKRLGRRKSWMVPCQYLIGAFMLYLSYKVNDIMGDNGGSPNVVFLMLIFLPLNF 152
Query: 600 LAATQDIAVDGWALTMLKRCNVGHASTCNTVGQTAGFFLG 719
LAATQDIAVDGWALTML R NVG+ASTCN VGQTAG+FLG
Sbjct: 153 LAATQDIAVDGWALTMLSRKNVGYASTCNAVGQTAGYFLG 192
>Z50859-3|CAA90728.1| 632|Caenorhabditis elegans Hypothetical
protein T26C5.3a protein.
Length = 632
Score = 219 bits (535), Expect = 2e-57
Identities = 102/160 (63%), Positives = 124/160 (77%)
Frame = +3
Query: 240 IKGDELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAP 419
+KGD +I +LLFLY LQG+PLGL GA+P+LL K ++Y QA FS WPFS+KLLWAP
Sbjct: 127 LKGDISSILLLLFLYLLQGVPLGLIGAIPLLLSGKHVSYGSQAIFSFAYWPFSLKLLWAP 186
Query: 420 IVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVSYCVTDWLGIDGEPPSMTILTVSFLLLNF 599
IVD++F GRRK+W+VP QYLIG M+ +SY V D +G +G P++ L + FL LNF
Sbjct: 187 IVDSVFSKRLGRRKSWMVPCQYLIGAFMLYLSYKVNDIMGDNGGSPNVVFLMLIFLPLNF 246
Query: 600 LAATQDIAVDGWALTMLKRCNVGHASTCNTVGQTAGFFLG 719
LAATQDIAVDGWALTML R NVG+ASTCN VGQTAG+FLG
Sbjct: 247 LAATQDIAVDGWALTMLSRKNVGYASTCNAVGQTAGYFLG 286
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 450 GRRKTWLVPVQYLIGIVMIIVSYCVTDWLGID----GEPPSMTILTVSF-LLLNFLA--- 605
G +K++L+ V+I SYC+ W+G + G S T+LTV F +++ +A
Sbjct: 279 GIKKSFLIGAGLASFFVIIYASYCLAFWVGTNFVYSGRLESGTVLTVFFSVMMGSMALGQ 338
Query: 606 ATQDIAVDGWAL 641
A Q A G AL
Sbjct: 339 AGQQFATIGTAL 350
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 450 GRRKTWLVPVQYLIGIVMIIVSYCVTDWLGID----GEPPSMTILTVSF-LLLNFLA--- 605
G +K++L+ V+I SYC+ W+G + G S T+LTV F +++ +A
Sbjct: 279 GIKKSFLIGAGLASFFVIIYASYCLAFWVGTNFVYSGRLESGTVLTVFFSVMMGSMALGQ 338
Query: 606 ATQDIAVDGWAL 641
A Q A G AL
Sbjct: 339 AGQQFATIGTAL 350
>Z81142-4|CAB03506.1| 338|Caenorhabditis elegans Hypothetical
protein ZK1037.7 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 402 KLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVSYCVTDWLGIDGEPPSMTILTVS 581
K L I + ++W + R T+L V L+ + + + V+ +LG+ SM I+ V+
Sbjct: 62 KTLGDHIYEDVYWTDCWPRDTYLCSVVILVSEFFVTIVFRVSPFLGL-----SMAIIRVA 116
Query: 582 FLLLNFLA 605
L +F A
Sbjct: 117 VLYFSFNA 124
>AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical
protein D2063.2 protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 252 ELNIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFS--LVNWP 392
+L ++ FL+T+ L L A +L N+ +TY +S LV+WP
Sbjct: 241 QLPTNIVRFLFTILTASLMLISADDTILSNRLLTYIGDISYSLYLVHWP 289
>AF039051-3|AAB94261.2| 347|Caenorhabditis elegans Hypothetical
protein C14C6.3 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 382 TKLNSACCVYVMPLFCKSI 326
TKLN+ CC++V PL +++
Sbjct: 119 TKLNTRCCIFVDPLILENV 137
>Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical
protein C01H6.5a protein.
Length = 588
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 75 MKHSITGRFRVLTSVLSMTMFLFW 4
M +TG R LTSVL M+ F++W
Sbjct: 1 MACKVTGPNRHLTSVLEMSSFVYW 24
>AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear
receptor NHR-23 protein.
Length = 588
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 75 MKHSITGRFRVLTSVLSMTMFLFW 4
M +TG R LTSVL M+ F++W
Sbjct: 1 MACKVTGPNRHLTSVLEMSSFVYW 24
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,005,966
Number of Sequences: 27780
Number of extensions: 358425
Number of successful extensions: 937
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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