Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c18
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g50920.1 68416.m05575 phosphatidic acid phosphatase-related /... 33 0.26
At1g22710.1 68414.m02838 sucrose transporter / sucrose-proton sy... 32 0.35
At1g78895.1 68414.m09197 expressed protein 30 1.4
At5g43610.1 68418.m05331 sucrose transporter-related / sucrose-p... 29 3.2
At2g14670.1 68415.m01650 sucrose transporter, putative / sucrose... 29 3.2
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 29 3.2
At5g06170.1 68418.m00688 sucrose transporter, putative / sucrose... 29 4.3
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 28 5.7
At1g66570.1 68414.m07564 sucrose transporter, putative / sucrose... 28 5.7
At4g23310.1 68417.m03359 receptor-like protein kinase, putative ... 28 7.5
At2g07739.1 68415.m00990 expressed protein 28 7.5
At2g45180.1 68415.m05625 protease inhibitor/seed storage/lipid t... 27 9.9
At1g43720.1 68414.m05023 hypothetical protein 27 9.9
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 27 9.9
>At3g50920.1 68416.m05575 phosphatidic acid phosphatase-related /
PAP2-related contains Pfam profile PF01569: PAP2
superfamily
Length = 279
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = -1
Query: 655 LFNIVKAQPSTAISCVAAKKFNNRKDTVSIVIEGGSPSIPSQSVTQYDTIIITIPIKYWT 476
L+ ++ + ++A+S V + N + T ++ + G PS +QS++ + ++ + + W
Sbjct: 126 LWAVIGSISNSALSVVLKRILNQERPTTTLRSDPGMPSSHAQSIS-FISVFAVLSVMEWL 184
Query: 475 GTSQVFL 455
GT+ V L
Sbjct: 185 GTNGVSL 191
>At1g22710.1 68414.m02838 sucrose transporter / sucrose-proton
symporter (SUC2) nearly identical to sucrose-proton
symporter SUC2 [Arabidopsis thaliana] GI:407092
Length = 512
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +3
Query: 447 FGRRKTWLVPVQYLIGIVMIIVSYC--VTDWLGIDGEPPSMTILTVSFLLLNFLAATQDI 620
FGRR+ ++V L+ + + ++ Y + +G + P T F L ++ +
Sbjct: 96 FGRRRPFIVAGAGLVTVAVFLIGYAADIGHSMGDQLDKPPKTRAIAIFALGFWILDVANN 155
Query: 621 AVDGWALTMLKRCNVGHASTCNTVGQTAGFFLGICNVSG 737
+ G L + G+A T FF+ + NV G
Sbjct: 156 TLQGPCRAFLADLSAGNAKKTRTANAFFSFFMAVGNVLG 194
>At1g78895.1 68414.m09197 expressed protein
Length = 164
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 363 VACTLCLYFVKALGQL-QLIPVVYPVMCIGTTKQLC 259
V +CLYF+ ALG+L + V Y +C+ LC
Sbjct: 102 VKVVICLYFLSALGRLISGVTVAYAGLCLFCLSMLC 137
>At5g43610.1 68418.m05331 sucrose transporter-related /
sucrose-proton symporter-related similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 492
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 447 FGRRKTWLVPVQYLIGIVMIIVSYCVT--DWLGIDGEPPSMTILTVSFLLLNFLAATQDI 620
FGRR+ ++ L+ + ++++ Y +G + P V F L ++ +
Sbjct: 97 FGRRRPFIAMGALLVAVAVVLIGYAADFGHSMGDKVDEPVKMRAVVIFALGFWILDVANN 156
Query: 621 AVDGWALTMLKRCNVGHASTCNTVGQTAGFFLGICNVSG 737
+ G L G A T FF+ + NV G
Sbjct: 157 TLQGPCRAFLGDLAAGDAKKTRTANAFFSFFMAVGNVLG 195
>At2g14670.1 68415.m01650 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, SUC2 [Arabidopsis thaliana] GI:407092,
sucrose transporter [Arabidopsis thaliana] GI:12057172;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 492
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 447 FGRRKTWLVPVQYLIGIVMIIVSYCVT--DWLGIDGEPPSMTILTVSFLLLNFLAATQDI 620
FGRR+ ++ L+ + ++++ Y +G + P V F L ++ +
Sbjct: 97 FGRRRPFIATGALLVAVAVVLIGYAADFGHSMGDKIDKPVKMRAVVIFALGFWILDVANN 156
Query: 621 AVDGWALTMLKRCNVGHASTCNTVGQTAGFFLGICNVSG 737
+ G L G A T FF+ + NV G
Sbjct: 157 TLQGPCRAFLGDLAAGDAKKTRTANAFFSFFMAVGNVLG 195
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 185 R*IFALC*SHNCCSYSLNVCCFESR---PH*Y 99
R +F LC S CC VCC + R PH Y
Sbjct: 366 RELFGLCFSWKCCEIESAVCCKDGRHCCPHDY 397
>At5g06170.1 68418.m00688 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 491
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +3
Query: 447 FGRRKTWLVPVQYLIGIVMIIVSYCVT--DWLGIDGEPPSMTILTVSFLLLNF-LAATQD 617
FGRR+ ++ L+ + +I++ + +G D ++ I V F ++ F + +
Sbjct: 97 FGRRRPFIATGALLVALAVILIGFAADFGHTMG-DKLDEAVKIRAVGFFVVGFWILDVAN 155
Query: 618 IAVDGWALTMLKRCNVGHASTCNTVGQTAGFFLGICNVSG 737
+ G L G A T FF+ + NV G
Sbjct: 156 NTLQGPCRAFLGDLAAGDAKKTRTANAIFSFFMAVGNVLG 195
>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile PF01301
: Glycosyl hydrolases family 35
Length = 988
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 634 QPSTAISCVAAKKFNNRKDTVSIVIEGGSPSIPSQSVT 521
QP T + C A NN +DT +I +G +PS+S++
Sbjct: 312 QPGTKV-CAAFLSNNNTRDTNTIKFKGQDYVLPSRSIS 348
>At1g66570.1 68414.m07564 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 491
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 447 FGRRKTWLVPVQYLIGIVMIIVSYCVT--DWLGIDGEPPSMTILTVSFLLLNFLAATQDI 620
FGRR+ ++ L+ + ++++ Y +G + P V F L ++ +
Sbjct: 96 FGRRRPFIATGALLVAVSVVLIGYAADFGHSMGDKIDKPVKMRAVVIFALGFWILDVANN 155
Query: 621 AVDGWALTMLKRCNVGHASTCNTVGQTAGFFLGICNVSG 737
+ G L G A T FF+ + NV G
Sbjct: 156 TLQGPCRAFLGDLAAGDAQKTRTANAFFSFFMAVGNVLG 194
>At4g23310.1 68417.m03359 receptor-like protein kinase, putative
similar to receptor-like protein kinase 4 (gi:13506745),
5 (gi:13506747), and 6 (gi:13506749) from Arabidopsis
thaliana; contains Pfam protein kinase domain PF00069
Length = 830
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 69 VSFIKSISIFILVWS*FKTANIKAIRAAIMTLTKRKNSPENEELIENGDA 218
VS + +F+ V+S K I A + KRK++ E L ENGD+
Sbjct: 438 VSITALLLLFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDS 487
>At2g07739.1 68415.m00990 expressed protein
Length = 199
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 345 GITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGRRKTWLVPVQYLIGIVMIIVS-YC 521
G+ Y FS+ PF + LL A ++D E G K ++ G +M+ +S Y
Sbjct: 26 GLYYGFLTTFSI--GPFYLFLLRARVMDE---GEEGTEKKVSATTGFIAGQLMMFISIYY 80
Query: 522 VTDWLGIDGEPPSMTILTVSFLLLNF 599
L + G P ++T+L + +LL +F
Sbjct: 81 APLHLAL-GRPHTITVLALPYLLFHF 105
>At2g45180.1 68415.m05625 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to 14 kDa
polypeptide [Catharanthus roseus] GI:407410; contains
Pfam protease inhibitor/seed storage/LTP family domain
PF00234
Length = 134
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = -1
Query: 742 REPETLHXPKKNPAVWPT----VLHVEAC-PTLHLFNIVKAQPSTAISCVAAKKFNNRKD 578
+ P+T PKK PAV PT L + C L L N+V P C + N +
Sbjct: 34 KPPKTPKSPKKAPAVKPTCPTDTLKLGVCADLLGLVNVVVGSPPKTPCCTLLQGLANLEA 93
Query: 577 TVSI 566
V +
Sbjct: 94 AVCL 97
>At1g43720.1 68414.m05023 hypothetical protein
Length = 314
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 654 RCNVGHASTCNTVG 695
+C VGHA+ C+TVG
Sbjct: 259 KCTVGHATKCSTVG 272
>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
similar to BEL1-like homeodomain 1 (GI:13877517)
[Arabidopsis thaliana]; similar to homeodomain protein
GI:7239157 from (Malus domestica); contains weak hit to
Pfam profile PF00046: Homeobox domain
Length = 538
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 327 MLLQNKGITYTQQAEFSLVNWPFSVKL-LWAPIVDAMFWPEFGRRKTWLV 473
ML + G++ Q A NW + ++ LW P+++ M+ EFG L+
Sbjct: 386 MLAKQTGLSKNQVA-----NWFINARVRLWKPMIEEMYKEEFGDESELLI 430
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,793,459
Number of Sequences: 28952
Number of extensions: 322163
Number of successful extensions: 809
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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