Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c17
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...   178   6e-45
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.     178   6e-45
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...   178   6e-45
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...   178   6e-45
AY075378-1|AAL68219.1|  163|Drosophila melanogaster LD08233p pro...    30   3.9  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    30   3.9  
AY118950-1|AAM50810.1|  422|Drosophila melanogaster LD33701p pro...    29   6.7  
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l...    29   6.7  
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot...    29   6.7  
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p...    29   6.7  
AE014297-3299|AAF56116.2|  424|Drosophila melanogaster CG4449-PA...    29   6.7  
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,...    29   6.7  
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,...    29   6.7  
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,...    29   6.7  
BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p pro...    29   8.9  
AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein...    29   8.9  
AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB...    29   8.9  
AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA...    29   8.9  

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +1

Query: 112 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 288
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 289 PINENDTPTSLEMEEGDTIEVYQQQTGG 372
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +1

Query: 112 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 288
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 289 PINENDTPTSLEMEEGDTIEVYQQQTGG 372
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +1

Query: 112 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 288
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 289 PINENDTPTSLEMEEGDTIEVYQQQTGG 372
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score =  178 bits (434), Expect = 6e-45
 Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
 Frame = +1

Query: 112 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 288
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 289 PINENDTPTSLEMEEGDTIEVYQQQTGG 372
           PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AY075378-1|AAL68219.1|  163|Drosophila melanogaster LD08233p
           protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 141 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTACAMA 1
           F+ + L   HFE+  VL   +      K++W+L  ++N  + A  +A
Sbjct: 88  FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAALVLA 134


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
            isoform A protein.
          Length = 2190

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = -3

Query: 620  EVTYSIWYTYNLPYHKLFETHNALRSSAMLLCVTKLLPNTFTDTNDVSLKLT*G*SLRRV 441
            ++ YS+    N+       T +   SS  +   T +  +TF+ T  +++  T   S R +
Sbjct: 1737 DLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREI 1796

Query: 440  HLIDFDPLEMVNP 402
             +  F+ +E +NP
Sbjct: 1797 TVFQFNDVENINP 1809


>AY118950-1|AAM50810.1|  422|Drosophila melanogaster LD33701p
           protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 259 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 351
           + ++  FDG  ++ NDTP + +ME  + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418


>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
            isoform protein.
          Length = 5554

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 94   NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 270
            +H + +    +K E +        Q N I Q   K  T +    +   D AG +++  + 
Sbjct: 2915 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2974

Query: 271  FRFDGQPINENDTPTSLEMEEGDTIEVYQ 357
              FD +PI+E  TP++      D  +V++
Sbjct: 2975 SDFDTKPISEEATPSTAATYRSDMTDVFR 3003


>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
            protein long isoformprotein.
          Length = 5533

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 94   NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 270
            +H + +    +K E +        Q N I Q   K  T +    +   D AG +++  + 
Sbjct: 2921 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2980

Query: 271  FRFDGQPINENDTPTSLEMEEGDTIEVYQ 357
              FD +PI+E  TP++      D  +V++
Sbjct: 2981 SDFDTKPISEEATPSTAATYRSDMTDVFR 3009


>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
            protein.
          Length = 5476

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 94   NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 270
            +H + +    +K E +        Q N I Q   K  T +    +   D AG +++  + 
Sbjct: 2864 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2923

Query: 271  FRFDGQPINENDTPTSLEMEEGDTIEVYQ 357
              FD +PI+E  TP++      D  +V++
Sbjct: 2924 SDFDTKPISEEATPSTAATYRSDMTDVFR 2952


>AE014297-3299|AAF56116.2|  424|Drosophila melanogaster CG4449-PA
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 259 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 351
           + ++  FDG  ++ NDTP + +ME  + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420


>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
            isoform C protein.
          Length = 5476

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 94   NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 270
            +H + +    +K E +        Q N I Q   K  T +    +   D AG +++  + 
Sbjct: 2864 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2923

Query: 271  FRFDGQPINENDTPTSLEMEEGDTIEVYQ 357
              FD +PI+E  TP++      D  +V++
Sbjct: 2924 SDFDTKPISEEATPSTAATYRSDMTDVFR 2952


>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
            isoform B protein.
          Length = 5533

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 94   NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 270
            +H + +    +K E +        Q N I Q   K  T +    +   D AG +++  + 
Sbjct: 2921 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2980

Query: 271  FRFDGQPINENDTPTSLEMEEGDTIEVYQ 357
              FD +PI+E  TP++      D  +V++
Sbjct: 2981 SDFDTKPISEEATPSTAATYRSDMTDVFR 3009


>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
            isoform A protein.
          Length = 5560

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +1

Query: 94   NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 270
            +H + +    +K E +        Q N I Q   K  T +    +   D AG +++  + 
Sbjct: 2921 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2980

Query: 271  FRFDGQPINENDTPTSLEMEEGDTIEVYQ 357
              FD +PI+E  TP++      D  +V++
Sbjct: 2981 SDFDTKPISEEATPSTAATYRSDMTDVFR 3009


>BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p
           protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


>AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein
           protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419


>AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB,
           isoform B protein.
          Length = 657

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416


>AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA,
           isoform A protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 306 HSNIT*DGRGRHNRGLPTADRRSVPSV 386
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,127,760
Number of Sequences: 53049
Number of extensions: 601368
Number of successful extensions: 1135
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)