Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c16
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    29   0.027
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.44 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 686 LSGNIVIRVCIHRRVLH*RLLSFLDRIFKNFTVNQWHFRNFEGRVLR-DRFCY*NFCHRN 510
           + G   I + +   ++H    +++  ++ N  +N+W F  F  +VL  D  C  N+  + 
Sbjct: 428 IEGTTSILINVPSLIIHVSTSAYVATVWINSVINRWKFIEFIRKVLEFDVKCVSNYTKQQ 487

Query: 509 NVIH 498
           + IH
Sbjct: 488 SKIH 491


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 332 VCDTFYYCLD 303
           +CD FYYC+D
Sbjct: 121 ICDKFYYCVD 130


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = -3

Query: 467 LIWYRNYFNSILWY----QFRSKFL*CFNFHRRFLFGRSR 360
           +++  +  N IL+     +FR+ F+ C   +R+F F R+R
Sbjct: 339 MVYLNSAINPILYNLMSSKFRTGFIICSESNRKFYFKRAR 378


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 336 LPIKLSRRTTPPKKESPMKIETLQKFAPELVPKNTVE 446
           +P+  + R+TP K+E     +  Q+   E+V K  V+
Sbjct: 835 VPLNSTPRSTPDKREKSPTSDKAQEADGEVVVKKEVD 871


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 417 PELVPKNTVEIVSIPNQVL 473
           P  +PK   E+  +PN  L
Sbjct: 17  PAFMPKGNKEVFDVPNNFL 35


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 354  RRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQ 467
            + T PP  E P  +E +++   E  P      V  P Q
Sbjct: 1772 QETIPPIDEEPPSVEAVEEEREEAPPSVHSSTVVPPPQ 1809


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,900
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)