Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c16
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 33 0.29
SB_52980| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_396| Best HMM Match : DUF217 (HMM E-Value=4.3) 29 2.7
SB_24355| Best HMM Match : SAM_2 (HMM E-Value=3e-07) 29 2.7
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 29 3.5
SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 28 8.1
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 32.7 bits (71), Expect = 0.29
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +3
Query: 345 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 524
+ SR TP ++E ++TL +LV K+ + +++ + L V + K V +M
Sbjct: 728 QFSREITPEEREPT--VDTLS--ISDLV-KDALPVINKSGESLLSV-SNKTAGEVSAMEV 781
Query: 525 VSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRKKSLMKDASMN-TNTDHDI 677
+SVTE S+ K P N+++ + ++ K+KK+ K+ + ++D +I
Sbjct: 782 ISVTEPSRNLSAPKPPASRKRNTQMSQKSVSKKKKNSGKNGGKSLEDSDEEI 833
>SB_52980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 372 KKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSV-TETIA 548
K+E K+E + + KN++EI +P+ E+ V N+ M +V + TE I
Sbjct: 83 KEEYIEKLEVMLDSLEQYTRKNSIEIAGVPSGTF---SCEEVVINMARMLKVDIKTEDIE 139
Query: 549 KNSSFKIPKMPLVNSEVLKNAIEKRKKSLMK 641
+ K K + + K K+K + +K
Sbjct: 140 ISHRLKKRKQEEFSPIIAKLICHKKKAAFLK 170
>SB_396| Best HMM Match : DUF217 (HMM E-Value=4.3)
Length = 262
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 372 KKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSV-TETIA 548
K+E K+E + KN++EI +P+ E+ V N+ M +V + TE I
Sbjct: 85 KEEYIEKLEVKLDSLKQYTRKNSIEIAGVPSGTF---SCEEVVINMARMLKVDIKTEDIE 141
Query: 549 KNSSFKIPKMPLVNSEVLKNAIEKRKKSLMK 641
+ K K + + K K+K + +K
Sbjct: 142 ISHRLKKRKQEEFSPIIAKFICHKKKAAFLK 172
>SB_24355| Best HMM Match : SAM_2 (HMM E-Value=3e-07)
Length = 352
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 327 TNALPIKLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVS--IPNQVLEIVEAEKAV 500
TN+ K S P SP+K K P + P++ +E+ S +P E +E++++
Sbjct: 215 TNSSNKKKSAPPLPKHVVSPVKRPNKVKAPPPIPPRSDLEVNSQDVPKVASESIESKESD 274
Query: 501 DNVI 512
NVI
Sbjct: 275 SNVI 278
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 327 TNALPIKLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEK 494
T + P++ S T P+ K+E +Q PE++P EI+ I +V E++ EK
Sbjct: 738 TKSTPVE-SEPTETPEVVPSEKLEGIQAEVPEVMPSEKQEIIHI--EVPEVMAFEK 790
>SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 31 CSLMLLIFIWLV*ENLMKSLFGSPCTGGFLF 123
CSL ++ FIW + + + F S C GG LF
Sbjct: 47 CSLYVITFIWCI--SRYRKAFRSECDGGRLF 75
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 616 SIAFLRTSLLTNGILGILKEEFFAIVSVTETSVIEITLS-TAFSASTISKT*FGI 455
SIAF T L I+ + + + VSV +++ EI S ++F+++ + T F +
Sbjct: 874 SIAFATTPLFQTSIIPVTTQSYEKTVSVIKSTTFEILSSLSSFTSAHVPTTLFEV 928
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Frame = +3
Query: 294 KNIIQTIIESITNALPIKLSRRT-TPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQV 470
K ++ + + +P K S PK +SP + + +P +VP+ TV +++
Sbjct: 107 KKTVEPYLPEVDGYIPKKSSVVVKVEPKVDSPKPAVSYRNKSPTMVPRETVPQSKQASKL 166
Query: 471 LEIVEAEKAVDNVISMT-EVSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRKKSLMKDA 647
I KA + S +S ++ K+S K N V K+ + ++K + +
Sbjct: 167 PSIASQLKAPSSRTSRRHSISKRNSMDKHSEEYRQKRERNNVAVRKSRFKSKQKFIETQS 226
Query: 648 SMNTNTDHD 674
+ T+ +
Sbjct: 227 RVEELTEEN 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,767,508
Number of Sequences: 59808
Number of extensions: 291219
Number of successful extensions: 721
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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