Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c10
         (713 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK001021-1|BAA91470.1|  268|Homo sapiens protein ( Homo sapiens ...    33   1.3  
BC027937-1|AAH27937.1|  530|Homo sapiens RAI2 protein protein.         32   2.3  
AF136587-1|AAD33688.1|  530|Homo sapiens retinoic acid-induced p...    32   2.3  
Z93242-2|CAI42725.1|  530|Homo sapiens retinoic acid induced 2 p...    31   5.4  
BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.      30   7.2  
AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.      30   7.2  

>AK001021-1|BAA91470.1|  268|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10159 fis, clone HEMBA1003528. ).
          Length = 268

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 313 VPYPVHVAKPYPVPVPQIIKVPHI 384
           VPYPV V  P P+P+P  I +PH+
Sbjct: 122 VPYPVIVPLPVPIPIP--IPIPHV 143


>BC027937-1|AAH27937.1|  530|Homo sapiens RAI2 protein protein.
          Length = 530

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +1

Query: 313 VPYPVHVAKPYPVPVPQIIKVP 378
           VPYPV V  P PVP+P  I VP
Sbjct: 232 VPYPVIVPLPVPVPIPIPIPVP 253


>AF136587-1|AAD33688.1|  530|Homo sapiens retinoic acid-induced
           protein protein.
          Length = 530

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +1

Query: 313 VPYPVHVAKPYPVPVPQIIKVP 378
           VPYPV V  P PVP+P  I VP
Sbjct: 232 VPYPVIVPLPVPVPIPIPIPVP 253


>Z93242-2|CAI42725.1|  530|Homo sapiens retinoic acid induced 2
           protein.
          Length = 530

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 313 VPYPVHVAKPYPVPVPQIIKVP 378
           VPYPV V  P PVP+P  I +P
Sbjct: 232 VPYPVIVPLPVPVPIPIPIPMP 253


>BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +1

Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTP 393
           P P  I   VP PV V  P PVP P     P +  P
Sbjct: 88  PAPAWIPTPVPTPVPVRNPTPVPTPARTLTPPVRVP 123


>AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +1

Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTP 393
           P P  I   VP PV V  P PVP P     P +  P
Sbjct: 88  PAPAWIPTPVPTPVPVRNPTPVPTPARTLTPPVRVP 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.131    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,172,784
Number of Sequences: 237096
Number of extensions: 2163356
Number of successful extensions: 3932
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3873
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)