Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c10
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28790.1 68416.m03593 expressed protein 33 0.19
At3g18810.1 68416.m02389 protein kinase family protein contains ... 31 0.57
At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family... 31 0.57
At5g66370.1 68418.m08368 hypothetical protein similar to unknown... 31 1.0
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 30 1.3
At4g40020.1 68417.m05666 hypothetical protein 30 1.8
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 30 1.8
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 29 2.3
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 29 2.3
At5g45400.1 68418.m05579 replication protein, putative similar t... 29 2.3
At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1) domain... 29 2.3
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 2.3
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 29 2.3
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 29 4.0
At3g52290.1 68416.m05747 calmodulin-binding family protein simil... 29 4.0
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 29 4.0
At5g19870.1 68418.m02363 expressed protein contains Pfam profile... 28 5.3
At5g07150.1 68418.m00815 leucine-rich repeat family protein cont... 28 5.3
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 28 5.3
At3g13225.1 68416.m01660 WW domain-containing protein contains P... 28 5.3
At5g04530.1 68418.m00453 beta-ketoacyl-CoA synthase family prote... 27 9.3
At4g21440.1 68417.m03099 myb family transcription factor (MYB102... 27 9.3
At2g23460.1 68415.m02801 extra-large guanine nucleotide binding ... 27 9.3
At1g18030.1 68414.m02230 protein phosphatase 2C, putative / PP2C... 27 9.3
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/107 (23%), Positives = 33/107 (30%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTPGNGHNSHEASEDGVQNNSYNVQEN 465
P P P P P P P TP G S + SE N +
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASMKKESNSKSE 340
Query: 466 HEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTPSGYNAPT 606
E + G S T + +Y S +G+PSG P+
Sbjct: 341 SESAASG-SVSKTKETNKGSSGDTYKDTTGTSSGSPSGSPSGSPTPS 386
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 31.5 bits (68), Expect = 0.57
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 397 NGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYR--PTSNIHSFEGSPSYSQDAAQFSEE 570
NG+N++ +G NN N N++ + GG + R P + +S SPS + A
Sbjct: 112 NGNNNNGNDNNGNNNNGNNNDNNNQNNGGGSNNRSPPPPSRNSDRNSPSPPRALAPPRSS 171
Query: 571 YAGT-PSGYNAP 603
G+ SG N P
Sbjct: 172 GGGSNSSGNNEP 183
>At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family
protein related to LENOD2 [Lupinus luteus]
gi|296830|emb|CAA39050; and genefinder
Length = 302
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPV-PVPQIIKVPHIVTPGNGHNSHEAS 423
P P + +P H K PV P+I+ + H V P GH H+++
Sbjct: 251 PIPHPVPPSPGHPPHQNKKIPVNQYPRILPISHPVPPSPGHPPHQSA 297
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTPGNGHNSHEASEDGV 435
P+PV P P AK P + +PH V P GH H+ ++ V
Sbjct: 51 PHPVPPSPGHP-PHQNAKISVNQYPSVFPIPHPVPPSPGHPPHQNTKISV 99
>At5g66370.1 68418.m08368 hypothetical protein similar to unknown
protein (emb CAB62624.1)
Length = 150
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +1
Query: 385 VTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFS 564
V G H+ H+ N YN + SY P+ N +S + P YSQ A
Sbjct: 77 VKTGGHHHHHQHHYPHEPNLHYNSDSYYGQPPSYNSYWPSDNCYSRQHPPYYSQSLAMQP 136
Query: 565 EEYAGTPSGYN 597
+ GY+
Sbjct: 137 YHHQYPYPGYS 147
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 406 NSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTP 585
+S ++ G + S + + P+DGG T + S GSPSY D S AG P
Sbjct: 136 SSGDSGSPGSDSGSPSA-DTGSPTDGGSYGDTTGDSGSSAGSPSYPSDDG--SGSTAGGP 192
Query: 586 SG 591
SG
Sbjct: 193 SG 194
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 364 IIKVPHIVTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGS 531
I+K+ H + HN + E+ N N QEN + S G S P+S+ + F+GS
Sbjct: 454 IMKLAHH-NHNHKHNKETSEEETKNANGGNHQENSDESGEGNS--PSSDSYLFKGS 506
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 397 NGHNS---HEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPS 537
NGH S + +S +G ++N Y+ NH S G T + H+ S S
Sbjct: 119 NGHTSTGSNHSSGNGSRHNGYSSGSNHSSSTGSNHSSSTGSTHNNHSSGS 168
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Frame = +1
Query: 394 GNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPS------YSQDAA 555
G + S SY E GQ+ P + I S++GS S Y +A
Sbjct: 149 GRSYESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPPPTGYGMEAV 208
Query: 556 QFSEEYAGTPSGYNAP 603
Y+G P Y P
Sbjct: 209 PPPTSYSGGPPSYGGP 224
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Frame = +1
Query: 394 GNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPS------YSQDAA 555
G + S SY E GQ+ P + I S++GS S Y +A
Sbjct: 149 GRSYESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPPPTGYGMEAV 208
Query: 556 QFSEEYAGTPSGYNAP 603
Y+G P Y P
Sbjct: 209 PPPTSYSGGPPSYGGP 224
>At5g45400.1 68418.m05579 replication protein, putative similar to
replication protein A 70kDa [Oryza sativa (japonica
cultivar-group)] GI:13536993; contains InterPro entry
IPR004365: OB-fold nucleic acid binding domain, PF04057:
Replication factor-A protein 1, N-terminal domain
Length = 853
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 403 HNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSN------IHSFEGSPSYSQDAAQFS 564
HNS +A V NS Q H SD G+ Y ++N +H+ + Y Q Q S
Sbjct: 169 HNSSDAGRYCVSANSPQPQVVHSSSDAGR-YGVSANSPQRQVVHNSPDAGRYGQ--PQVS 225
Query: 565 EEYAGTPSGY 594
+ Y GT SGY
Sbjct: 226 QRY-GTGSGY 234
>At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein various predicted proteins
contains Pfam profile PF00564: PB1 domain
Length = 477
Score = 29.5 bits (63), Expect = 2.3
Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 10/116 (8%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAK--PYPVPVPQIIKVP----HIVTPGNGHNSHEASEDGVQNNS 447
P PV IK P PV K P P V Q +P PG G H Q+
Sbjct: 296 PPPVFIKPESPEPVSTPKSNPQPEQVMQQSNLPVNSQWQYAPGPGQQVHYQGHTIHQSPV 355
Query: 448 Y----NVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTPSGYNAP 603
Y +V NH G +P +++ P Q+ ++Y P GY+ P
Sbjct: 356 YYVPGSVPGNHMVQQGNHMVQPGNHMVQPVQMP------GQYLQQYHHVPMGYHQP 405
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 286 PYPVKIKERVPYPVHVAKPYPVPVPQIIKVP 378
P+P + P+P KP+P P P I+K P
Sbjct: 90 PHPKPPTVKPPHPKPPTKPHPHPKPPIVKPP 120
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Frame = +1
Query: 286 PYPVKIKERVPYPV-----HVAKPYPVPVPQIIKVPHIVTPGNGHNSHEASEDGVQNNSY 450
P P + PYP + A YP P P P +P H S G + S+
Sbjct: 22 PAPYRPPSSEPYPPPPTNQYSAPYYPYPPPPYATPPPYASPPPPHQHTSGSHSGPLDYSH 81
Query: 451 NVQENHEPSDGGQSYRPTSNIHSFEGSPS 537
N Q PS + P + HSF+ PS
Sbjct: 82 NPQ----PSSLAAA-PPEYHRHSFDYQPS 105
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 316 PYPVHVAKPYPVPVPQIIKVPHIVTP 393
PY VH +P P P ++ +PH P
Sbjct: 125 PYLVHAVPYHPPPFPPMVPLPHAAGP 150
>At3g52290.1 68416.m05747 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 430
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 487 QSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTPSGYNAPT 606
QS +P + HS GS ++D F+ ++ + GY APT
Sbjct: 336 QSEQPCNRRHSTCGSIPSTRDDESFTSSFSQSVPGYMAPT 375
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 382 IVTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQF 561
I TP + HNS + ++ Y Q + S+ P S HS G S Q + F
Sbjct: 94 IPTPSSSHNSKASVSSASSSSFYFPQTSPSSCSTPSSFSPDSFSHSNTGPWSIPQPSPVF 153
Query: 562 S 564
S
Sbjct: 154 S 154
>At5g19870.1 68418.m02363 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 276
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 457 QENHEPSDGGQSYRPTSNIHSFEGS 531
Q+NH+P D P++++H+FE S
Sbjct: 71 QKNHQPFDPNDGTIPSNHLHNFEHS 95
>At5g07150.1 68418.m00815 leucine-rich repeat family protein
contains weak similarity to LRR receptor-like protein
kinase [Nicotiana tabacum] gi|7672732|gb|AAF66615;
contains Pfam PF00560 domain Leucine Rich Repeat
Length = 553
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 313 VPYPVHVAKPYPVPVPQIIKVPHIVTPGNGHNS 411
VP P P P PQ+ +VPH V H S
Sbjct: 196 VPPPPAQPPPAQTPPPQLSEVPHAVNKKKSHKS 228
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 409 SHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTPS 588
+ +AS V N S + +E +EPSDG ++ P +++ + S ++ + E+ PS
Sbjct: 735 ARDASASTVANGSES-EETYEPSDGDTAHVPGTSVEAAGESKLVTRMEVEIPEKTHSDPS 793
>At3g13225.1 68416.m01660 WW domain-containing protein contains Pfam
profile PF00397: WW domain
Length = 863
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 304 KERVPYPVHVAKPYPVPVPQIIKVPHIVTPGNGHNSHEASEDGVQNNSYNVQEN--HEPS 477
+E +P P ++ P P P P P NGH + S D + Y V ++ H+ +
Sbjct: 513 EEWIPPPPSESEDVPPPPPDSYSEPIPPPPDNGHVASSLSSDSL-GVPYTVPQSYMHQSA 571
Query: 478 DGGQSYR---PTSN 510
D Y P SN
Sbjct: 572 DYATQYNLSYPESN 585
>At5g04530.1 68418.m00453 beta-ketoacyl-CoA synthase family protein
KCS1 fatty acid elongase 3-ketoacyl-CoA synthase 1,
Arabidopsis thaliana, EMBL:AF053345
Length = 464
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 676 LSVARIGYVQKYYHRFQNYRNCYML 602
LS + Y+ K+ + +N RNCYML
Sbjct: 12 LSTLFVFYIFKFVFKRRNQRNCYML 36
>At4g21440.1 68417.m03099 myb family transcription factor (MYB102)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 350
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +1
Query: 493 YRPTSNIHS---FEGSPSYSQDAAQFSEEYAGTPSGYNAPT 606
Y P+ N +S F PSYS + F+ TPS +PT
Sbjct: 269 YNPSFNDYSSSNFVLDPSYSDQSFNFANSVLNTPSSSPSPT 309
>At2g23460.1 68415.m02801 extra-large guanine nucleotide binding
protein / G-protein (XLG) identical to extra-large
G-protein (XLG) [Arabidopsis thaliana] GI:3201680
Length = 888
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 532 PSYSQDAAQFSEEYAGTPSGYNAP 603
P D F+EEY G P YN P
Sbjct: 2 PLKEDDCCLFAEEYDGPPLSYNIP 25
>At1g18030.1 68414.m02230 protein phosphatase 2C, putative / PP2C,
putative contains similarity to protein phosphatase 2C
GI:3777604 from [Rattus norvegicus]
Length = 351
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 391 PGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSY-SQDAAQFSE 567
P N H + S + + + +++ E S GG++ N + E PS+ S++ +F
Sbjct: 14 PNNKHAADSFSSEDLVSPVKKAKKSEEVSGGGEAVAAVGNREAEEDKPSFVSEEKKEFLV 73
Query: 568 E 570
E
Sbjct: 74 E 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.131 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,704,184
Number of Sequences: 28952
Number of extensions: 310179
Number of successful extensions: 700
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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