Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c08
(705 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 25 0.79
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 22 4.2
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 7.4
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 21 7.4
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 7.4
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 9.8
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 24.6 bits (51), Expect = 0.79
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 415 NSERLFTCNYIVSVR*DIYDDYDITALRTHDG 510
NSER Y V+V D+ +ITA+ T+DG
Sbjct: 456 NSERNQIGQY-VTVNGDVVSHLNITAIHTNDG 486
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 173 LDFILSKLKITVHKWSP 123
L ++LS+ I+VH WSP
Sbjct: 222 LVWLLSQAWISVHIWSP 238
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 276 VFITVIFASFYAY*FG 229
V + IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 167 FILSKLKITVHKWSP 123
++LS+ IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 276 VFITVIFASFYAY*FG 229
V + IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 167 FILSKLKITVHKWSP 123
++LS+ IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 173 LDFILSKLKITVHKWSP 123
L ++LS+ I+VH WSP
Sbjct: 455 LVWLLSQAWISVHIWSP 471
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 173 LDFILSKLKITVHKWSP 123
L ++LS+ I+VH WSP
Sbjct: 455 LVWLLSQAWISVHIWSP 471
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 276 VFITVIFASFYAY*FG 229
V + IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 167 FILSKLKITVHKWSP 123
++LS+ IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 276 VFITVIFASFYAY*FG 229
V + IFAS++AY FG
Sbjct: 380 VLLINIFASYFAYIFG 395
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 167 FILSKLKITVHKWSP 123
++LS+ IT+H W+P
Sbjct: 470 WLLSQTWITLHIWTP 484
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 664 YAFNLLIVLFQCLYH 620
Y + L++LF CL H
Sbjct: 267 YGVHTLLILFSCLLH 281
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 691 FIFNLILFCYAFNLLIVL 638
+ FNL C+ F L+V+
Sbjct: 317 YTFNLFYLCFCFYWLLVM 334
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 61 FFHLLAMKYSSCLNTITVIII 123
FFH+ S LNT++ ++I
Sbjct: 295 FFHVKKSTIFSILNTVSTLLI 315
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 691 FIFNLILFCYAFNLLIVL 638
+ FNL C+ F L+V+
Sbjct: 273 YTFNLFYLCFCFYWLLVM 290
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/26 (23%), Positives = 13/26 (50%)
Frame = +1
Query: 553 CFRDTNRCRNLGILIIWGLYSTDGIN 630
C++DT + + + W Y+ I+
Sbjct: 377 CWQDTKSANKIAMKLFWAQYTNKMID 402
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,866
Number of Sequences: 336
Number of extensions: 3406
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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