Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c03
(546 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 150 7e-39
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 149 2e-38
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 125 2e-31
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 124 5e-31
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 25 0.57
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.0
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 578
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 150 bits (364), Expect = 7e-39
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 654
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 149 bits (361), Expect = 2e-38
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 148 bits (358), Expect = 4e-38
Identities = 75/90 (83%), Positives = 78/90 (86%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQR IFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFA 426
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 149 bits (361), Expect = 2e-38
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 125 bits (302), Expect = 2e-31
Identities = 61/64 (95%), Positives = 61/64 (95%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKE 257
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 124 bits (299), Expect = 5e-31
Identities = 63/78 (80%), Positives = 66/78 (84%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQR IFA
Sbjct: 35 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFA 94
Query: 204 GKQLXDGRTLSDYNIQKE 257
GKQL DGRTLSDYNIQKE
Sbjct: 95 GKQLEDGRTLSDYNIQKE 112
Score = 98.3 bits (234), Expect = 4e-23
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +3
Query: 153 IQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
IQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 24.6 bits (51), Expect = 0.57
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 28 SHKFYVWFILATQCKYSSKPL--RGRPLHWRWKLPTLSK 138
+H FY W +A + + L RGR + R++ L K
Sbjct: 202 NHTFYPWMAIADSMTFGANGLRRRGRQTYTRYQTLELEK 240
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 4.0
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -3
Query: 220 SXNCF-PAKMRRCWS 179
S CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,674
Number of Sequences: 336
Number of extensions: 2732
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -