Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c03
(546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 6e-37
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 150 6e-37
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 1e-36
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 149 1e-36
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 126 1e-29
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 124 6e-29
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 122 3e-28
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 59 3e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 42 2e-04
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 41 8e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.002
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 35 0.038
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07) 34 0.087
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.35
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_36239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.3
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 28 4.3
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 28 5.7
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 7.6
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 27 7.6
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 149 bits (361), Expect = 1e-36
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 6e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 149 bits (361), Expect = 1e-36
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 149 bits (361), Expect = 1e-36
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 149 bits (361), Expect = 1e-36
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 83.0 bits (196), Expect = 1e-16
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQI VK KT TL+VEASDT+E+VK IQ++EGIPP QRL++
Sbjct: 63 KESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYE 121
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVL 278
++L D R+L+DYNI++ S LHL L
Sbjct: 122 EEELVDNRSLADYNIKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 126 bits (304), Expect = 1e-29
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +3
Query: 57 SNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLS 236
++TMQIFVKTLTGKTITLEVE SDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLS
Sbjct: 76 TSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 135
Query: 237 DYNIQK 254
DYNIQK
Sbjct: 136 DYNIQK 141
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 124 bits (298), Expect = 6e-29
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = +3
Query: 255 ESTLHLVLRLRGGXIEPSLRILAMKYXCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 434
ESTLHLVLRLRGG IEPSLRILA KY C+KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 122 bits (293), Expect = 3e-28
Identities = 57/62 (91%), Positives = 58/62 (93%)
Frame = +3
Query: 171 IPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGXIEPSLRILAMKYXCEKMI 350
IPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLVLRLRGG IEPSLRILA KY C+KMI
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMI 61
Query: 351 CR 356
CR
Sbjct: 62 CR 63
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 255 ESTLHLVLRLRGGXIEPSLRILAMKYXCEKMICR 356
ESTLHLVLRLRGG IEPSLRILA KY C+KMICR
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 72 IFVKTLTGKTITLEVEA-SDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNI 248
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 249 QKESTLHLVLRLRGGXIEPSLRI 317
+TLHL++RL GG P+ R+
Sbjct: 133 FAGATLHLIVRLLGGEC-PTYRL 154
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 57 SNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQ---DKEGIPPDQQRLIFAGKQLXDGR 227
S M I KTL +T +E+ +T+ +K I+ K+ P +LI+AGK L D
Sbjct: 64 SVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDN 123
Query: 228 TLSDYNIQKES 260
L +YNI ++S
Sbjct: 124 PLKEYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 TMQIFVKTLTGKTITLEVEASDT-IENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSD 239
T Q+F T TL +D + +K+ I+ K GIP D QRL F K+L D TL+
Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAK 64
Query: 240 YNIQK 254
N+++
Sbjct: 65 VNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXD-GRTLSDY 242
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 243 NIQKESTLHLVLR 281
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.1 bits (77), Expect = 0.038
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQ+ VKTL +T T V +EGIP ++QRLIF GK L D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 34.7 bits (76), Expect = 0.050
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 90 TGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLH 269
+G L++ + TIE ++ + DK G PP QR I K +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 270 LVLRLRGGXIE 302
+ L G +E
Sbjct: 104 YLYLLSGRNVE 114
>SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07)
Length = 642
Score = 33.9 bits (74), Expect = 0.087
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -2
Query: 464 GYYLILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHF 342
G +++ LL G+ V +S+LC A GS KTG ++T +F
Sbjct: 19 GPAIVISLLIGAIPVCLSSLCYAEFGSRISKTGSSYTYTYF 59
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKE 167
M ++++TLTG L V +TI +VKA IQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 129 TIENVKAXIQDKEGIPPDQQRLIFA-GKQLXDGRTLSDYNIQKESTLHL 272
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 168 GIPPDQQRLIFAGKQLXDGRTLSDYN 245
GIP ++QRLIF GK L D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 190 VSSLPGNNXKMAALFQTITSRKNPHFTWF 276
+ ++ N K+AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_36239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 103 LHWRWK-LPTLSKM-SKLXSKTRKVFLQTNNVSSLPGNNXKMAALFQTITS 249
+++ WK +P + + +KL +T++ + TN+ LPG K +F+++ +
Sbjct: 274 IYFSWKRVPKANTLGTKLAGRTQRFYFDTNSGVILPGETLKFPFIFKSLNA 324
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 93 GKTITLEVE-ASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXD 221
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 431 SQIVSVSALCLATVGSTRMKTGIAFTANHFLTXILHGENAKG 306
S + LC+ +G+ + GIAF A L ++ G+NA+G
Sbjct: 252 SLLAQTLKLCIPKIGAFVIVYGIAFFAYAQLACLVFGQNAEG 293
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 381 EDEDGHSIYGKSFSHXYTSWRECEGKV 301
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 175 LQTNNVSSLPGNNXKM-AALFQTITSRK--NPHFT--WF*DLEEVQLNLPFAFS 321
++ NNVSS PG N + + TI +RK NP T WF + Q + AF+
Sbjct: 641 VECNNVSSCPGGNVTLNCSAMATIDTRKLSNPVMTSEWFYYRDLTQRRIKRAFN 694
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 87 LTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQL 215
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTL 142
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +3
Query: 87 LTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTL 266
L ++ + D +V I+D G + + G + D + +++ + L
Sbjct: 237 LRSPSVDATLRGQDISASVYQEIRDLGGTGVIALKPVMRGPDINDDGSHERESLRANAVL 296
Query: 267 HLVLRLRGGXIEPSLRILAMKY 332
LVLR++GG + +R LA+++
Sbjct: 297 PLVLRMKGGE-DSQVRDLAVRF 317
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
+Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 246 IQ 251
+Q
Sbjct: 774 LQ 775
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 62 HNANIRQNPYGEDHYI--GGGSFRHY 133
HNA I++N G D+Y+ GGG + Y
Sbjct: 187 HNAPIKRNCSGNDYYVKAGGGVYFEY 212
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,231,069
Number of Sequences: 59808
Number of extensions: 331317
Number of successful extensions: 772
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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