Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c02
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 384 FFRILNFIRQFCCRFLA 334
           F  + NF R+FC R+ A
Sbjct: 538 FLGLCNFYRKFCARYSA 554


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +1

Query: 94  NFHVDVFEIFINVLMLFNWVH 156
           N H+  +++  +V++L +W+H
Sbjct: 270 NSHLYDYDLTTHVMLLSDWMH 290


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +1

Query: 94  NFHVDVFEIFINVLMLFNWVH 156
           N H+  +++  +V++L +W+H
Sbjct: 270 NSHLYDYDLTTHVMLLSDWMH 290


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 514 EQILHEIDEIKTKLNGIRTVKHNK 585
           +QIL E D+I   L+ ++++ + K
Sbjct: 217 DQILREFDQIVVILSKVKSILNKK 240


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = +1

Query: 460 HNELAHVKLVTERIDKQNEQILHEIDEIKTK 552
           H+++AH      R+D++ + +  +ID ++ K
Sbjct: 100 HSKIAHFLNKMIRLDERFQSVGLQIDTVREK 130


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 185 FVRTVTEHFGTLKVSNVVFANRNTIRS 265
           F+RTV + F    ++     N NTI S
Sbjct: 407 FMRTVWKFFNIFLITPFYNFNENTIHS 433


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 164 SRECTQLNSIKTLMNISKTST*KFKITLDS 75
           +R+      +KTL  + +    K K+T+D+
Sbjct: 244 NRQTLDTADVKTLTTVVEKECYKMKVTIDA 273


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 164 SRECTQLNSIKTLMNISKTST*KFKITLDS 75
           +R+      +KTL  + +    K K+T+D+
Sbjct: 170 NRQTLDTADVKTLTTVVEKECYKMKVTIDA 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,220
Number of Sequences: 336
Number of extensions: 3121
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)