Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10c01
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   2.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.5  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 272 CDVLASSIKSAIPRI 228
           CD L + IK A+P I
Sbjct: 45  CDALGNQIKGALPEI 59


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 103 VFVSVNQRDIVLRLSKNITRVLVLKSI 183
           +FV+V    I+L  +   TR+++LKS+
Sbjct: 100 IFVNVFFWVIILMSNYAFTRIILLKSV 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 385 ILQGALNGRTGIKLYN*DLKLLL 317
           I+QG     TG+K  N  LK+L+
Sbjct: 230 IIQGGYISVTGLKRVNPKLKVLI 252


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 344 IQLRLEALASRQHSHCHFHRLCPRCDVLASSIKSA 240
           + L +   AS QH H H     P+     +S+ +A
Sbjct: 41  LSLGMSPYASSQHHHHHLQARPPQDSPYDASVAAA 75


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 441 MLF*FCRYVLLLINYYI 491
           ++F FC ++ L   YYI
Sbjct: 143 LVFVFCYFIYLFTVYYI 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,142
Number of Sequences: 336
Number of extensions: 2020
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)