Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b24
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 366 e-102
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 366 e-102
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 365 e-101
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 365 e-101
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 350 5e-97
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 350 5e-97
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 335 1e-92
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 182 2e-46
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 180 6e-46
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 179 2e-45
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 179 2e-45
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 178 3e-45
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 177 6e-45
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 176 1e-44
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 176 1e-44
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 171 3e-43
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 125 3e-29
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 125 3e-29
At1g16650.1 68414.m01994 expressed protein 30 1.3
At1g09800.1 68414.m01100 tRNA pseudouridine synthase family prot... 29 3.1
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 28 7.1
At4g33360.1 68417.m04743 terpene cyclase/mutase-related low simi... 28 7.1
At4g16150.1 68417.m02450 calmodulin-binding protein similar to a... 28 7.1
At5g03100.1 68418.m00258 F-box family protein contains F-box dom... 27 9.3
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 27 9.3
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 27 9.3
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 27 9.3
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 366 bits (901), Expect = e-102
Identities = 162/205 (79%), Positives = 183/205 (89%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRECISIH GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKTVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
R+RKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F +YP+PQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLD 205
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 366 bits (901), Expect = e-102
Identities = 162/205 (79%), Positives = 183/205 (89%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRECISIH GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKTVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
R+RKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F +YP+PQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLD 205
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 365 bits (897), Expect = e-101
Identities = 161/205 (78%), Positives = 182/205 (88%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRECISIH GQAG+Q+GNACWELYCLEHGIQPDGQMP DKTVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
R+RKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F +YP+PQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLD 205
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 365 bits (897), Expect = e-101
Identities = 161/205 (78%), Positives = 182/205 (88%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRECISIH GQAG+Q+GNACWELYCLEHGIQPDGQMP DKTVGGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
R+RKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F +YP+PQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D + ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLD 205
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 350 bits (861), Expect = 5e-97
Identities = 158/205 (77%), Positives = 177/205 (86%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE ISIH GQAG+Q+GN+CWELYCLEHGIQPDG MPSD TVG D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
RVRKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F IYP+PQ+STA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D A ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLD 205
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 350 bits (861), Expect = 5e-97
Identities = 158/205 (77%), Positives = 177/205 (86%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE ISIH GQAG+Q+GN+CWELYCLEHGIQPDG MPSD TVG D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
RVRKLAD CTGLQGFL+ LL+ERLSVDYGKKSKL F IYP+PQ+STA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D A ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLD 205
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 335 bits (824), Expect = 1e-92
Identities = 149/205 (72%), Positives = 174/205 (84%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE ISIH GQAG+Q+GN+CWELYCLEHGIQPDG MPSD TVG D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
R+RKLAD CTGLQGFL+ LL+ERLSVD+GKKSKL F IYP+PQ+STA
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYNS+L+TH+ LEH+D ++D
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLD 205
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 182 bits (443), Expect = 2e-46
Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 3/208 (1%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DSFNTFFSETG 271
MRE + I GQ G QIG+ WE+ C EHGI P G+ VG D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 272 AGKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 451
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 452 VLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQI 631
VLD VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Query: 632 STAVVEPYNSILTTHTTLEHSDAAFMVD 715
S VVEPYN+ L+ H +E++D ++D
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLD 203
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 180 bits (439), Expect = 6e-46
Identities = 80/205 (39%), Positives = 125/205 (60%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLD 204
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 179 bits (435), Expect = 2e-45
Identities = 82/205 (40%), Positives = 122/205 (59%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLD 203
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 179 bits (435), Expect = 2e-45
Identities = 82/205 (40%), Positives = 122/205 (59%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLD 203
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 178 bits (434), Expect = 3e-45
Identities = 81/205 (39%), Positives = 124/205 (60%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLD 204
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (431), Expect = 6e-45
Identities = 82/205 (40%), Positives = 123/205 (60%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + + F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLD 203
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 176 bits (428), Expect = 1e-44
Identities = 81/205 (39%), Positives = 122/205 (59%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + L F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLD 203
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 176 bits (428), Expect = 1e-44
Identities = 81/205 (39%), Positives = 124/205 (60%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ C LQGF + LL+ ++ +Y + + F+++P+P++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLD 203
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 171 bits (417), Expect = 3e-43
Identities = 80/205 (39%), Positives = 122/205 (59%)
Frame = +2
Query: 101 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 280
MRE + I GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 281 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQISTA 640
VRK A+ LQGF + LL+ ++ +Y + + F+++P+P++S
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 641 VVEPYNSILTTHTTLEHSDAAFMVD 715
VVEPYN+ L+ H +E++D ++D
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLD 203
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 125 bits (302), Expect = 3e-29
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 3/207 (1%)
Frame = +2
Query: 104 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 283
RE I++ GQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 284 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 457
+PRA+ IDLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 458 DRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQIS 634
D + + AD L+GF++ L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 635 TAVVEPYNSILTTHTTLEHSDAAFMVD 715
VV+PYNS+LT ++D ++D
Sbjct: 180 DVVVQPYNSLLTLKRLTLNADCVVVLD 206
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 125 bits (301), Expect = 3e-29
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 3/207 (1%)
Frame = +2
Query: 104 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 283
RE I++ GQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 284 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 457
+PRA+ IDLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 458 DRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQIS 634
D + + AD L+GF++ L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 635 TAVVEPYNSILTTHTTLEHSDAAFMVD 715
VV+PYNS+LT ++D ++D
Sbjct: 180 DVVVQPYNSLLTLKRLTLNADCVVVLD 206
>At1g16650.1 68414.m01994 expressed protein
Length = 521
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -1
Query: 271 SCFAEECVEGIVSAADGFVRGHLPVWLDAMFETIQ---LPTRVADLHTSLARVDRYALT 104
SC +E E I+ G V+ H P L T++ P ADL LA VD L+
Sbjct: 54 SCLKDEKPENILLIPSGGVQDHWPASLKKFVHTLRSLSFPREQADLQAILADVDMVPLS 112
>At1g09800.1 68414.m01100 tRNA pseudouridine synthase family protein
contains Pfam profile PF01416: tRNA pseudouridine
synthase
Length = 372
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +3
Query: 114 YLSTRARLVCKSATRVGSCIVSNMASNQTGRCPRTKPSAAETIPSTHSSAKQEPVNMFLE 293
++ ++ C S T G +SN+ R + KP E +P Q VN FL+
Sbjct: 91 FIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKP--GEVLPPHEPGVVQRAVNHFLQ 148
Query: 294 Q 296
+
Sbjct: 149 R 149
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 276 PAPVSLKNVLKESSPPPTVLSEGICPSG 193
P P S V KES+ PP V++ G +G
Sbjct: 287 PVPTSSAAVAKESNGPPAVVANGASENG 314
>At4g33360.1 68417.m04743 terpene cyclase/mutase-related low
similarity to squalene-hopene cyclase from Zymomonas
mobilis [SP|P33990]
Length = 344
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 436 RNCRFSLRQGQETR*SMHRTAGLSDLP 516
R C LR+G R + RT+ LSDLP
Sbjct: 27 RLCHVLLRRGHSVRALVRRTSDLSDLP 53
>At4g16150.1 68417.m02450 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 906
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 580 LW*EIQT*IRDISGTTNLYCGCGALQLYPHNSHHIGTFRC 699
LW + T G +NL C CG L++ P +G +RC
Sbjct: 388 LWLSVSTEYFQHLGRSNLICICGELRV-PAEFLQMGVYRC 426
>At5g03100.1 68418.m00258 F-box family protein contains F-box domain
Pfam:PF00646
Length = 307
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 534 PDQVLHHSLWNVSPSIMVRNPNLNSRY 614
PD++LHH L N + +R L+ R+
Sbjct: 15 PDEILHHILANTPTKLAIRTSVLSKRW 41
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPS-DKTVGGGDDSFNTFFSETGAGKHVPRAVFID-LEPTVVDEV 334
LY L G P D +P+ K + GG + + S A +PR + +D ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPS-DKTVGGGDDSFNTFFSETGAGKHVPRAVFID-LEPTVVDEV 334
LY L G P D +P+ K + GG + + S A +PR + +D ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPS-DKTVGGGDDSFNTFFSETGAGKHVPRAVFID-LEPTVVDEV 334
LY L G P D +P+ K + GG + + S A +PR + +D ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,037,974
Number of Sequences: 28952
Number of extensions: 346194
Number of successful extensions: 1229
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -