Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b22
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 173 HPMEEDTKCIVHQTL 217
           HP EED K I++Q +
Sbjct: 331 HPSEEDVKRIINQPM 345


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 616 VSEWLCLLLNQDVLMILI 563
           VS W CLL    VL IL+
Sbjct: 302 VSVWKCLLFFVSVLFILL 319


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 616 VSEWLCLLLNQDVLMILI 563
           VS W CLL    VL IL+
Sbjct: 302 VSVWKCLLFFVSVLFILL 319


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 616 VSEWLCLLLNQDVLMILI 563
           VS W CLL    VL IL+
Sbjct: 302 VSVWKCLLFFVSVLFILL 319


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 616 VSEWLCLLLNQDVLMILI 563
           VS W CLL    VL IL+
Sbjct: 302 VSVWKCLLFFVSVLFILL 319


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = -2

Query: 384 LSSCFTLNHFKCSSIWHIRKSYCCC 310
           +  C +      S IW + +S  CC
Sbjct: 66  IGRCASYIQVSGSKIWQMERSCMCC 90


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 596 FIKPRCLNDFNLRASTPTTS 537
           F+ PRC  D N   S P ++
Sbjct: 290 FVGPRCEGDINECLSNPCSN 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,358
Number of Sequences: 336
Number of extensions: 3440
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)