Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b22
         (706 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0269 - 16617292-16618852,16622763-16623562                       31   0.89 
09_04_0625 - 19044775-19045078,19045178-19045382,19045534-190461...    29   3.6  
12_02_0266 - 16582912-16584918,16585041-16585229                       28   8.3  
12_01_0461 + 3618414-3618782,3619664-3619794,3620177-3620294,362...    28   8.3  

>12_02_0269 - 16617292-16618852,16622763-16623562
          Length = 786

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 445 NPNIALYDMIMKLAPNEFGSLLNPCILYMRQEVVGVDALKLKSLR 579
           NPN      I+KL+ N   S L  C LY+       D +K  S+R
Sbjct: 401 NPNSKWMKHILKLSYNNLSSDLKTCFLYLHMYPENYDIMKKDSMR 445


>09_04_0625 -
           19044775-19045078,19045178-19045382,19045534-19046168,
           19046334-19047391
          Length = 733

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/80 (22%), Positives = 38/80 (47%)
 Frame = +1

Query: 223 LQILEDACKKQGFQPLDYNLKFHNQIMDLTTTIRFSNVPNRATLEMVECETRREESIVTI 402
           +++++   +KQ   PL     F N  +  + T +  +  +R  ++ + C    ++    I
Sbjct: 477 VRVIDARMEKQLNSPLQAAGLFFNPGIFFSPTFKMQSYAHRGLVKTISCLVPDDDIQDKI 536

Query: 403 GLMLEDGERRTADFNPNIAL 462
            L LE+ ++ T DF   IA+
Sbjct: 537 FLQLEEYKKGTGDFGLPIAI 556


>12_02_0266 - 16582912-16584918,16585041-16585229
          Length = 731

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 22/92 (23%), Positives = 41/92 (44%)
 Frame = +1

Query: 373 TRREESIVTIGLMLEDGERRTADFNPNIALYDMIMKLAPNEFGSLLNPCILYMRQEVVGV 552
           ++RE + +   L +++      + NPN      I+KL+ N     L  C+LY+      +
Sbjct: 178 SQREVNKLDNWLKIKNSMGFELETNPNSKWMKHILKLSYNNLSWDLKTCLLYLHMYPENI 237

Query: 553 DALKLKSLRHLGLIKGKAILRLLNKLEDARQA 648
           + +K K L    + +G    R    LED  ++
Sbjct: 238 NIMK-KDLVRQWIAEGFITQRDNRDLEDIAES 268


>12_01_0461 +
           3618414-3618782,3619664-3619794,3620177-3620294,
           3620602-3620654,3620758-3620807,3620912-3621010,
           3621511-3621620,3621773-3621900,3622071-3622161,
           3622610-3622693,3622863-3623083,3623449-3623527,
           3624134-3624283,3624326-3624470,3624604-3624983,
           3625096-3625197
          Length = 769

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +1

Query: 373 TRREESIVTIGLMLEDGERRTADFNPNIALYDMIMKLAPNEFGSLLNPCILYMRQEVVGV 552
           TR E  I  +G    D  R   DF  ++ L    + +  N F SLL    LY+      +
Sbjct: 657 TRAERLITELGKESTDDCRLPYDFLHDVVLLSEHLNVKTNLFISLLRFSDLYLTTSSPEL 716

Query: 553 DAL-KLKSLRHLGLIKGKAILRLLNK 627
           D + K+K      L+ GKAI+ ++ +
Sbjct: 717 DGVWKMKP-----LLDGKAIMGIMQQ 737


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,290,066
Number of Sequences: 37544
Number of extensions: 299263
Number of successful extensions: 641
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)