Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b22
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical pr...    69   2e-12
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z69789-5|CAL36496.1|  476|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z69789-1|CAA93650.2|  540|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical
           protein B0024.10 protein.
          Length = 552

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
 Frame = +1

Query: 220 MLQILEDACKKQGFQPLDYNLKFHN-QIMDLTTTIRFSNVPNRATLEMVECETRREESIV 396
           M Q+LE+AC K GF+   + L+  + + +D +   R + + N ATLEM + E   E +I+
Sbjct: 3   MRQVLEEACLKSGFEVNSHRLQTQSRKPIDSSLPFRLTGLANNATLEMTQKEAVSENTII 62

Query: 397 TIGLMLEDGERRTADFNPNIALYDMIMKLAPNEFGSLLN-------PCILYMRQEVVGVD 555
            + +    G R       N  L D  +K   +EF   L        PCI+YM +   G +
Sbjct: 63  ELAIQTASGARHQKKVGVNQMLLD-ALKSFTSEFKEDLATTIDGSVPCIVYMNKRYTGAE 121

Query: 556 ALKLKSLRHLGLIKGKAILRLLN-KLEDARQANVSA 660
            L + SL  LG+  GK ++R +  KL D   A + A
Sbjct: 122 -LAVNSLSSLGVASGKCLIRHMRVKLSDQELATMQA 156


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
           protein T28C6.9 protein.
          Length = 1861

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +1

Query: 232 LEDACKKQGFQPLDYNLKFHNQIMDLTTTI--RFSNVPNRATLEMVEC---ETRREE 387
           L+D  +K+  + +D +++   QI DLT     R +   N +   M EC   ETRREE
Sbjct: 723 LDDMVEKEKKRAIDLDVELQEQI-DLTDRAVRRAAEAENESNQRMAECLEKETRREE 778


>Z69789-5|CAL36496.1|  476|Caenorhabditis elegans Hypothetical
           protein F17H10.3b protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 178 NGRRHKVHCTPDTSMLQILEDACKKQGFQPLD 273
           NG +  + C    S L+I++  C+K GF+  D
Sbjct: 128 NGEKTTIKCLVSDSTLEIMKIICEKLGFKNKD 159


>Z69789-1|CAA93650.2|  540|Caenorhabditis elegans Hypothetical
           protein F17H10.3a protein.
          Length = 540

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 178 NGRRHKVHCTPDTSMLQILEDACKKQGFQPLD 273
           NG +  + C    S L+I++  C+K GF+  D
Sbjct: 192 NGEKTTIKCLVSDSTLEIMKIICEKLGFKNKD 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,132,017
Number of Sequences: 27780
Number of extensions: 301414
Number of successful extensions: 769
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)