BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10b21 (750 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g31050.1 68415.m03788 plastocyanin-like domain-containing pro... 29 3.3 At2g44990.1 68415.m05602 dioxygenase-related low similarity to c... 29 4.4 At5g59270.1 68418.m07427 lectin protein kinase family protein co... 28 7.6 >At2g31050.1 68415.m03788 plastocyanin-like domain-containing protein contains plastocyanin-like domain Pfam:PF02298 Length = 200 Score = 29.1 bits (62), Expect = 3.3 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 115 SSGLVLFACAGLLFSGGAI--LGGSAAWSLFRMSYYFWTSDLGVELSSSVLF 264 +S L+L A G+ GG + +G S W++ ++Y W S + ++ S++F Sbjct: 11 TSLLILVALFGISV-GGTVHKVGDSDGWTIMSVNYETWASTITFQVGDSLVF 61 >At2g44990.1 68415.m05602 dioxygenase-related low similarity to carotenoid cleavage dioxygenase 1 [Arabidopsis thaliana] GI:3096910; contains Pfam profile PF03055: Retinal pigment epithelial membrane protein Length = 618 Score = 28.7 bits (61), Expect = 4.4 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 179 PPKMAPPLNKSPAHANKTKPLL 114 PPK PPL P H ++T P L Sbjct: 6 PPKFLPPLKSPPIHHHQTPPPL 27 >At5g59270.1 68418.m07427 lectin protein kinase family protein contains Pfam domains PF00139: Legume lectins beta domain and PF00069: Protein kinase domain Length = 668 Score = 27.9 bits (59), Expect = 7.6 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Frame = -2 Query: 185 ADPPKMAPPLNKSPAHANKTKPLLLMLTISVTKY-FL*FLNCITY----KSYSEYLEYFS 21 + PP PP P +K ++++ ++VT FL L Y K Y+E LE++ Sbjct: 270 SSPPPPPPPPPTPPTSRSKDSKNIIIICVTVTSIAFLLMLGGFLYLYKKKKYAEVLEHWE 329 Query: 20 STF 12 + + Sbjct: 330 NEY 332 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,783,927 Number of Sequences: 28952 Number of extensions: 330712 Number of successful extensions: 923 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 923 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1663169840 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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