Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b20
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 280 6e-76
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 280 7e-76
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 274 4e-74
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 8e-49
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 169 2e-42
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 142 2e-34
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 132 2e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 4e-31
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 130 7e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 129 2e-30
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 128 4e-30
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 6e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 101 6e-22
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 1e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 3e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 5e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 2e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 7e-04
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 30 1.7
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.3
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 2.3
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 29 3.0
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 29 4.0
SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.2
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 280 bits (687), Expect = 6e-76
Identities = 127/134 (94%), Positives = 129/134 (96%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 506 RKEAEGCDCLQGFQ 547
RKEAE CDCLQGFQ
Sbjct: 334 RKEAESCDCLQGFQ 347
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 280 bits (686), Expect = 7e-76
Identities = 126/134 (94%), Positives = 129/134 (96%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQ 547
RKEAE CDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 274 bits (672), Expect = 4e-74
Identities = 122/134 (91%), Positives = 129/134 (96%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 505
PR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 506 RKEAEGCDCLQGFQ 547
RKEAE CDC+QGFQ
Sbjct: 121 RKEAESCDCIQGFQ 134
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 190 bits (463), Expect = 8e-49
Identities = 85/92 (92%), Positives = 88/92 (95%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 325
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 326 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 421
PRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 169 bits (410), Expect = 2e-42
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +2
Query: 314 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 493
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 494 LDVVRKEAEGCDCLQGFQ 547
LDVVRKEAE CDC+QGFQ
Sbjct: 62 LDVVRKEAESCDCIQGFQ 79
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 142 bits (345), Expect = 2e-34
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = +2
Query: 308 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 487
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 488 SVLDVVRKEAEGCDCLQGFQ 547
++ DV+RKEAE CDC+QG Q
Sbjct: 71 NIFDVLRKEAENCDCMQGVQ 90
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 132 bits (319), Expect = 2e-31
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G QIG WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 500 VVRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
Score = 130 bits (313), Expect = 1e-30
Identities = 62/134 (46%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 503 VRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 555 IRKLADQCTGLQGF 568
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 131 bits (317), Expect = 4e-31
Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + + GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 500 VVRKEAEGCDCLQGF 544
+RK A+GC LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 130 bits (315), Expect = 7e-31
Identities = 62/135 (45%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
+RE + I GQ G QIG WE+ EHGI G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 500 VVRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 706 RIRKLADQCTGLQGF 720
Score = 130 bits (313), Expect = 1e-30
Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
Frame = +2
Query: 143 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGG 316
+ RE + + GQ G QIG WE+ EHGI G D + + N +++E G
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Query: 317 KYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 496
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 124 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 183
Query: 497 DVVRKEAEGCDCLQGF 544
D +RK A+ C LQGF
Sbjct: 184 DRIRKLADQCTGLQGF 199
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 323 VPRAVMVDLEPGTMDSV 373
VPRAV VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 129 bits (312), Expect = 2e-30
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 503 VRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 129 bits (311), Expect = 2e-30
Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + I GQ G QIG WE+ EHGI G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 503 VRKEAEGCDCLQGF 544
+RK A+GC LQGF
Sbjct: 493 LRKLADGCTGLQGF 506
Score = 126 bits (304), Expect = 1e-29
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE + + GQ G Q+G WE+ EHGI G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 503 VRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 926 IRKLADQCTGLQGF 939
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 128 bits (309), Expect = 4e-30
Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 500 VVRKEAEGCDCLQGF 544
RK A+ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 127 bits (307), Expect = 6e-30
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKY 322
RE V I GQ G Q+G WE+ EHGI G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 323 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 502
VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 503 VRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 540 IRKLADQCSGLQGF 553
Score = 109 bits (263), Expect = 1e-24
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 191 IGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGKYVPRAVMVDLEPGTM 364
+G WE+ EHGI G D + + N +++E GK+VPRAV DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 365 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 101 bits (241), Expect = 6e-22
Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + I GQ G QIG WE+ EHGI G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 320 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 499
+VPRAV VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 500 VVRKEAEGCDCLQGF 544
+RK A+ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = +2
Query: 278 ERINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 457
+ N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 458 HYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
HYT G E +D LD +RK A+ C LQGF
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +2
Query: 299 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 478
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 479 LVDSVLDVVRKEAEGCDCLQGF 544
+V+ V+D +RK + C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 365 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 319
MRE + + GQ G QIG WE+ EHGI G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 320 YVPRAVMVDLEPGTMDSVR 376
+VPRAV VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +2
Query: 425 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQ 547
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 65.7 bits (153), Expect = 3e-11
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Frame = +2
Query: 155 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE-RINVYYNEASGGKYVPR 331
IV +Q GQCGNQIG + +++I + DAT S +L R Y E S ++ R
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVE----DATKLNSRFLCKELTTRSCTEYEEESLARFFTR 58
Query: 332 ---------AVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGA 475
AV +D+E + S G P F Q G+GNNWA G G
Sbjct: 59 ENDDILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGP 118
Query: 476 ELVDSVLDVVRKEAEGCDCLQGF 544
+ +D VLD+V++E E CD L GF
Sbjct: 119 KSIDKVLDLVQREVEKCDRLDGF 141
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 544
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 511
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 371 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 511
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 203 FWEVISDEHGIDATGAYSG-DSDLQLERINVYYNE 304
FWEVI++EHGID G + S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 329 RAVMVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVD 487
R V VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 488 SVLDVVRKEAEGCDCLQG 541
+D +RKE E CD G
Sbjct: 99 MTMDAMRKEVERCDSFAG 116
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD--SDLQLERINVYYNEASGGK 319
MRE + I GQ G QIG WE+ EHGI G D +D + + +++E + GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 320 Y 322
+
Sbjct: 256 H 256
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 329 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 448
RAV++D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 602 KSKESPYQIQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPP 432
K ++ Q+ LP P+ + +LL L L PVP+ P Q P +P+++PP
Sbjct: 444 KQQQKHKQVVLPLPPASATPPPSSDGALLDLG-LDPVPSAPTQAPTPTPAAPTHAPP 499
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -1
Query: 491 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 333
P+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1080 PHQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 435 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 313
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 503 VRKEAEGCDCLQGFQ 547
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 270 CSLNASMSTITKLQGASTSREL*WWTLSLE 359
CSLN S S+ L+G S R + +W SLE
Sbjct: 907 CSLNDSPSSSIMLEGYSLGRAVDYWVYSLE 936
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +3
Query: 159 STSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGASTS 326
ST+ R + QSSG + A P T +T TC A+ +T QGASTS
Sbjct: 703 STTSRPQPAQQPAQSSGATPLEAQAEAP---TVSTTTCGAAATKTTSAISQGASTS 755
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 140 AIMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYS--GDSDLQLERINVYYNEASG 313
A +RE++ +Q G N +G +W + DA S L E + V E
Sbjct: 25 ATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDCLFREGLTVTGQET-- 82
Query: 314 GKYVPRAVMVDLE 352
Y PR ++ DL+
Sbjct: 83 --YTPRLLLYDLK 93
>SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.3 bits (60), Expect = 5.3
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +2
Query: 227 HGIDATGAYSGDSDLQLERINVYYNEASGGKYVPR-AVMVDLEPGTMDSVRSGPFGQIFR 403
+G+++TG+Y+ LER +V +AS G Y R A M+ + DS S G I R
Sbjct: 104 YGMNSTGSYASQYSKSLER-DVNRGKASVGDYYARKAEMLKILMTDNDSGESCTRGIIPR 162
Query: 404 -PDNFVFGQSGAGNNWAKGHYTEGAELV 484
+ G SG W A V
Sbjct: 163 LHQRYKLGVSGTKVAWTSADIAHYASTV 190
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 426 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 304
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 479 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQL 330
V PP+C+ L S P S A+ A++G + W + + P +QL
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQL 243
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 215 ISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPRAVMVDLEP 355
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,033,442
Number of Sequences: 59808
Number of extensions: 438617
Number of successful extensions: 1248
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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