Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b19
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 33 0.036
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 31 0.15
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 31 0.15
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 1.4
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 1.4
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 27 2.4
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.1
SPBC651.11c |apm3||AP-3 adaptor complex subunit Apm3 |Schizosacc... 26 4.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 4.2
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 5.5
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 26 5.5
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 5.5
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 26 5.5
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 7.3
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 25 7.3
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 25 9.6
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.6
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 25 9.6
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 25 9.6
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 33.1 bits (72), Expect = 0.036
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = +2
Query: 167 NKMGSNSSKPTDTSLVL---KTELELGNSDPRSPTPEITRTPLQGKN--GAKHNITKNID 331
N + S SSKPTDT+ + T E ++ SPT + TP+ + + IT +
Sbjct: 342 NTIISRSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSVLNSSTPITSS-S 400
Query: 332 LRKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTE 511
+ T L + PI S+ I N S S T TPI S+ +N T T
Sbjct: 401 ILNTSTPITSSSVLNSSTPITSSSILN--SSTPITSSTVLNSSTPITSSTALNTSTPITS 458
Query: 512 NLRLISDSCTSPITSKDKDNS 574
+ L S ++PITS NS
Sbjct: 459 SSVLNS---STPITSSSVLNS 476
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 31.1 bits (67), Expect = 0.15
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +2
Query: 353 TNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISD 532
T+ +++L +L + HL S DP R +++ S ++ L+ +E+++L
Sbjct: 1293 TDANDRLREATVVLFGTVAQHLPSNDP--------RLAVVMDSLLSVLSTPSESVQLAVA 1344
Query: 533 SCTSPITSKDKDNSCETY 586
C P+ K S E Y
Sbjct: 1345 VCLPPLVKKSLGKSKEYY 1362
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 31.1 bits (67), Expect = 0.15
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 3/148 (2%)
Frame = +2
Query: 215 LKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKLIHNNPIL 394
LK L+L N D + ++ T KN + DL++ TN + I+ + +
Sbjct: 654 LKYNLQLPNVDLLKESEAVSET----KNTKNNTFILKSDLKEEERLTNFTIEEINKHKAI 709
Query: 395 SAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISD--SCTS-PITSKDK 565
++ L+ D S ++ SSK + T + + I + S S +TS K
Sbjct: 710 GVALRKLLEEADTSSNFSS-SNNHVLDSSKHTVSSASTSSRKFIENYKSLESIGLTSFVK 768
Query: 566 DNSCETYMEAKEFSPDLISPKNFV*RVF 649
DN + E ++ + + PKN + +F
Sbjct: 769 DNKLKASKELQKLIEENVFPKNLILFIF 796
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 1.4
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Frame = +2
Query: 149 LLDYINNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNI 328
LL+Y+ + +G++ KP ++ + EL NSD E +R L AK +KN
Sbjct: 288 LLEYLEDIIGTSKYKP----IIEENMQELSNSDDICAEKE-SRLKLVLSEKAKLEDSKNS 342
Query: 329 ------DLRKTFESTNGDEK-LIHNNPILSAVIKNHLQSYDPR--SPTQDFERTPIIISS 481
D + F N + +++ +++N L S + + + + FE+T IS
Sbjct: 343 VLSFLKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISE 402
Query: 482 KINDLTNDTENLRLISDSCTS 544
K ++ + E + + CTS
Sbjct: 403 KNEEVKSLREKAAKVKNDCTS 423
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 356 NGDEKLIHNNPILSAVIKNHLQSYD 430
N +K IH NP+LS V + +S+D
Sbjct: 808 NNSQKDIHRNPLLSHVFDTNTKSFD 832
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 2.4
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +2
Query: 347 ESTNGDEKLIHNNPILS----AVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTEN 514
+S +EKL+H+NP V++ L + + SP D + K DL D EN
Sbjct: 76 DSVKQNEKLLHSNPTFKISKPTVLEQPLNAIEHLSPETDLSSSAEQQFMKELDLFFD-EN 134
Query: 515 LRL-----ISD-SCTSPITSKDKDNSCETYMEAK 598
+ L +SD SP T K + + E+ ++ K
Sbjct: 135 IPLSQLSAVSDGKADSPATKKSRRSYRESSLKRK 168
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 332 LRKTFESTNGDE---KLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTN 502
L+K + T D + I +V+KNH S R P+++ +P + +ND
Sbjct: 13 LKKLWNDTKNDYLEWERSQQGQISESVVKNHSPSKRKRRPSKEPSLSPKRRKNILNDQKK 72
Query: 503 DTENL 517
D E++
Sbjct: 73 DEESI 77
>SPBC651.11c |apm3||AP-3 adaptor complex subunit Apm3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 497 TNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNFV 637
TN L+L S TSPIT + N Y E P ++ KNF+
Sbjct: 12 TNGALLLQLESRGRTSPITLEHIKNELFRYKLRNEEPPFILHNKNFL 58
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 305 KHNITKNIDLRKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSK 484
KH + DL + + + L N +L + + SY +S T+D T IISS+
Sbjct: 497 KHYEQETKDLARQVQVLLHELDLCENGIVLGVDSRKKINSYVEKSLTEDETDTDQIISSR 556
Query: 485 I 487
+
Sbjct: 557 L 557
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.8 bits (54), Expect = 5.5
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 143 SSLLDYINNKMGSNSSKPTDTSLVLKTE-LELGNSDPRSPTPEITRTPLQG 292
SS L N S+ + P L L T L L +S PRS TP T + L+G
Sbjct: 1322 SSTLQVPFNASSSSLATPKKEPLRLDTNSLTLTSSMPRSFTPSYTPSFLEG 1372
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 338 KTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPII 472
K + D LI+ ++ AV+KN L +Y +PT + + I+
Sbjct: 546 KLWGMVRNDTVLINRANLMLAVLKNSLNTYIYMTPTTSVQPSQIL 590
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 420 CKWFFITADRMGLLCINFSSPFVDSNVFLRSIFFVML 310
CK +F+ DR+ +L + FS ++ ++F+V+L
Sbjct: 717 CKHYFL--DRLAILFLTFSPTMCMLSISFEALFYVVL 751
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 5.5
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 281 PLQGKNGAKHNITKNI---DLRKTFESTNGDEK-LIHNNPILSAVIKNHLQSYDPR-SPT 445
P +G+ +++ I KN D+ K++ D + + + I NHL R +PT
Sbjct: 456 PRRGRGSSRYEINKNFINSDVPKSYTYDGYDRYGCLAVDSFYN--IYNHLDPVAMRLNPT 513
Query: 446 QDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCE 580
D + I ++I + LR+IS S T P+ + + S +
Sbjct: 514 VDLSFSKGIHPTRILFTRKSSSILRMISHSNTDPVELRSYNQSLQ 558
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 170 KMGSNSSKPTDTSLVLKTELEL 235
K SN S+PT TS LKT+ L
Sbjct: 532 KATSNKSRPTTTSTELKTDARL 553
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 506 TENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNFV 637
T L +S + + I+ +D DNS + E+ SP + PK +
Sbjct: 634 TRRLSDLSVNSSGQISKQDFDNSNSIFSESSLSSPIIEEPKTLI 677
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 296 NGAKHNITKNIDLRKTFESTNGDEKLI 376
NG I +NIDL + F+ N D +LI
Sbjct: 617 NGTSIYICENIDLNEPFKVLNVDSELI 643
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 7.3
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 164 NNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKT 343
N G S++ T S+ TE + N++ ++ + + + K ++ +
Sbjct: 165 NEPAGVKSNEATKPSV---TEEKEKNAEQNKRRERLSISHIVTELAKKDEVSSESGSNEI 221
Query: 344 FESTNGDEKLIHNNPILSAVIKN--HLQSYDPRSPTQDFERTPIIIS 478
+ +E+L N +L A ++ HL Y RS T F PI++S
Sbjct: 222 VNAKLKNEQLDSNFTLLDAYLEPLVHLHEYSRRSNTLFFFYLPIVMS 268
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 25.0 bits (52), Expect = 9.6
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +2
Query: 122 NYTSYF*SSLLDYINNKMGSNSSKPTDTSLVLKTEL-ELGN--SDPRSPTPEITRTPLQG 292
N + F SS+LD+++ K N+ P D L + ++ EL D +
Sbjct: 1432 NADNLFQSSVLDHVHFKSVVNNEVPADERLAISDDIFELYRRLDDVIDLNSSLYSDDFIP 1491
Query: 293 KNGAKHNITK--NIDLRKTFESTNGDEK 370
NG HN+ K + L + ST G K
Sbjct: 1492 VNGKLHNVVKLFSYSLCQVEASTRGHIK 1519
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 560 DKDNSCETYMEAKEFSPDLISPKNFV 637
+ DN C + SP LI P NF+
Sbjct: 112 NNDNCCREIARRRSLSPLLILPLNFI 137
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 25.0 bits (52), Expect = 9.6
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 368 KLIHNNPILS-AVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLISDSCTS 544
+ + NP+ S A ++ + + P++ +Q ++TP + S+K L ND + + S
Sbjct: 80 RALAKNPVPSPAESESSERRHTPQTNSQKSQKTPRLSSNKRRTLKNDAK-----QRNSQS 134
Query: 545 PITSKDKDNSCETYMEAKEFSPDLIS 622
P T N +EA +P +S
Sbjct: 135 PGTDTSDANLTIQSIEAPRRAPQRLS 160
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 25.0 bits (52), Expect = 9.6
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +2
Query: 236 GNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKTFESTNGDEKLIHNNPILSAVIKNH 415
G D T E+TR+ L K+ + + S + I N P+ S +
Sbjct: 76 GKEDFSISTAEVTRSSLSSSRSTSSRSDKDSEKLYSNNSLSSSHSSILNGPLDSLSKPSV 135
Query: 416 LQSYDPRSPTQDFE-RTPIIISSKINDLTN 502
+++ P+ E +P++ + +DL+N
Sbjct: 136 PSNFNSMFPSSKQEGPSPLLDNQPSSDLSN 165
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,559,964
Number of Sequences: 5004
Number of extensions: 52953
Number of successful extensions: 164
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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