Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b19
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026156-1|AAH26156.2|  754|Homo sapiens leucine rich repeat con...    31   4.8  
AY963267-1|AAY46032.1|  754|Homo sapiens ROR gamma binding prote...    31   4.8  
AY313780-1|AAP81011.1|  633|Homo sapiens hypothetical protein FL...    31   4.8  
AK001866-1|BAA91949.1|  326|Homo sapiens protein ( Homo sapiens ...    31   4.8  
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.         30   8.3  
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.     30   8.3  

>BC026156-1|AAH26156.2|  754|Homo sapiens leucine rich repeat
           containing 36 protein.
          Length = 754

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 25/93 (26%), Positives = 39/93 (41%)
 Frame = +2

Query: 164 NNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKT 343
           NN +  N + P  T L     L  G S+ R    + + +P +     K NI  N++L+  
Sbjct: 436 NNAVLGNRTTPLRTLL-----LSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 490

Query: 344 FESTNGDEKLIHNNPILSAVIKNHLQSYDPRSP 442
           F+   G E L  +   L  +  NH      R+P
Sbjct: 491 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTP 523


>AY963267-1|AAY46032.1|  754|Homo sapiens ROR gamma binding protein
           70 protein.
          Length = 754

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 25/93 (26%), Positives = 39/93 (41%)
 Frame = +2

Query: 164 NNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKT 343
           NN +  N + P  T L     L  G S+ R    + + +P +     K NI  N++L+  
Sbjct: 436 NNAVLGNRTTPLRTLL-----LSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 490

Query: 344 FESTNGDEKLIHNNPILSAVIKNHLQSYDPRSP 442
           F+   G E L  +   L  +  NH      R+P
Sbjct: 491 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTP 523


>AY313780-1|AAP81011.1|  633|Homo sapiens hypothetical protein
           FLJ11004 protein.
          Length = 633

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 25/93 (26%), Positives = 39/93 (41%)
 Frame = +2

Query: 164 NNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKT 343
           NN +  N + P  T L     L  G S+ R    + + +P +     K NI  N++L+  
Sbjct: 315 NNAVLGNRTTPLRTLL-----LSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 369

Query: 344 FESTNGDEKLIHNNPILSAVIKNHLQSYDPRSP 442
           F+   G E L  +   L  +  NH      R+P
Sbjct: 370 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTP 402


>AK001866-1|BAA91949.1|  326|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11004 fis, clone PLACE1002941. ).
          Length = 326

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 25/93 (26%), Positives = 39/93 (41%)
 Frame = +2

Query: 164 NNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNIDLRKT 343
           NN +  N + P  T L     L  G S+ R    + + +P +     K NI  N++L+  
Sbjct: 168 NNAVLGNRTTPLRTLL-----LSPGTSEHRKIFTKRSLSPSKRGFKWKDNILANLNLKHG 222

Query: 344 FESTNGDEKLIHNNPILSAVIKNHLQSYDPRSP 442
           F+   G E L  +   L  +  NH      R+P
Sbjct: 223 FQDATGSEPLSSDLGSLHGLAGNHSPPISARTP 255


>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
          Length = 1036

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 176 GSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQ 289
           GS S  P DT+  +   L  G+S P SP+P +   P Q
Sbjct: 450 GSCSPVPADTAQTVGRRLSTGSSRPYSPSPLVGTIPEQ 487


>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
          Length = 1100

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 176 GSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQ 289
           GS S  P DT+  +   L  G+S P SP+P +   P Q
Sbjct: 514 GSCSPVPADTAQTVGRRLSTGSSRPYSPSPLVGTIPEQ 551


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,749,920
Number of Sequences: 237096
Number of extensions: 1580043
Number of successful extensions: 3444
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3444
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)