Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b17
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF025454-1|AAC71152.2|  378|Caenorhabditis elegans Hypothetical ...    29   3.5  

>Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC455.11 protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 351 CNTKVINKPKFHFT*FAIIKTYFCTNNILFHIEPLSTKLGYTIAQRYLQYLLSFQLIYL 175
           CNT +     F F       +++C+    F    + T++ YT        +LS QLI+L
Sbjct: 141 CNTVLFKVCNFQFERVDGCASFYCSLTTCFQSYAVITRIIYTSTNIVFSTILSIQLIFL 199


>AF025454-1|AAC71152.2|  378|Caenorhabditis elegans Hypothetical
           protein F34D6.1 protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -2

Query: 292 NIFLHQ*YFISHRTTLDQTRIYYCAKILTIFTFFSINLPTI 170
           ++FLHQ  F +   T+ + R+Y  + +  +  F  + LP++
Sbjct: 16  DLFLHQDAFCARYNTIRRIRVYIVSSLCAMAPFHLLRLPSV 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,304,433
Number of Sequences: 27780
Number of extensions: 384428
Number of successful extensions: 710
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)