Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b16
         (400 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF136170-1|AAP97260.1|   63|Homo sapiens cytochrome c oxidase VI...    46   4e-05
X16560-1|CAA34559.1|   63|Homo sapiens protein ( Human COX VIIc ...    39   0.007
BT007098-1|AAP35762.1|   63|Homo sapiens cytochrome c oxidase su...    39   0.007
BC007498-1|AAH07498.1|   63|Homo sapiens cytochrome c oxidase su...    39   0.007
BC001005-1|AAH01005.1|   63|Homo sapiens cytochrome c oxidase su...    39   0.007
AF067639-1|AAC73062.1|   63|Homo sapiens cytochrome c oxidase su...    39   0.007
DQ294736-1|ABC17635.1|  201|Homo sapiens E2-binding protein 3 va...    29   7.5  
BC030243-1|AAH30243.1|  492|Homo sapiens solute carrier family 2...    29   7.5  
AK125121-1|BAC86055.1|  194|Homo sapiens protein ( Homo sapiens ...    29   7.5  
AK055730-1|BAB70999.1|  212|Homo sapiens protein ( Homo sapiens ...    29   7.5  
BC084553-1|AAH84553.1|  371|Homo sapiens glutamate receptor, ion...    28   9.9  
BC041788-1|AAH41788.2|  371|Homo sapiens glutamate receptor, ion...    28   9.9  
AB097026-1|BAC77379.1|  371|Homo sapiens putative MAPK activatin...    28   9.9  

>AF136170-1|AAP97260.1|   63|Homo sapiens cytochrome c oxidase VIIc
           protein.
          Length = 63

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = +2

Query: 176 RHHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAKK 328
           R H++EGP +   NLPF   N++    + +++FG+GF APF I+ + + KK
Sbjct: 16  RSHYEEGPGK---NLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRHQLLKK 63


>X16560-1|CAA34559.1|   63|Homo sapiens protein ( Human COX VIIc
           gene for subunit VIIc of cytochrome c oxidase (EC
           1.9.3.1).  ).
          Length = 63

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 176 RHHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 325
           R H++EGP +   NLPF   N++       ++FG+ F  PF+++ + + K
Sbjct: 16  RSHYEEGPGK---NLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BT007098-1|AAP35762.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 176 RHHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 325
           R H++EGP +   NLPF   N++       ++FG+ F  PF+++ + + K
Sbjct: 16  RSHYEEGPGK---NLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BC007498-1|AAH07498.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 176 RHHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 325
           R H++EGP +   NLPF   N++       ++FG+ F  PF+++ + + K
Sbjct: 16  RSHYEEGPGK---NLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BC001005-1|AAH01005.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 176 RHHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 325
           R H++EGP +   NLPF   N++       ++FG+ F  PF+++ + + K
Sbjct: 16  RSHYEEGPGK---NLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>AF067639-1|AAC73062.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc precursor protein.
          Length = 63

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +2

Query: 176 RHHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 325
           R H++EGP +   NLPF   N++       ++FG+ F  PF+++ + + K
Sbjct: 16  RSHYEEGPGK---NLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>DQ294736-1|ABC17635.1|  201|Homo sapiens E2-binding protein 3
           variant 1 protein.
          Length = 201

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 209 TVEVVPRRGDVDSEASMIPALCRHSSCHG-KHW 114
           T + +PR       +S++  LCR  SCHG  HW
Sbjct: 21  TSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHW 53


>BC030243-1|AAH30243.1|  492|Homo sapiens solute carrier family 23
           (nucleobase transporters), member 3 protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 209 TVEVVPRRGDVDSEASMIPALCRHSSCHG-KHW 114
           T + +PR       +S++  LCR  SCHG  HW
Sbjct: 126 TSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHW 158


>AK125121-1|BAC86055.1|  194|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43131 fis, clone CTONG3005803, moderately
           similar to Mus musculus yolk sac permease-like molecule
           1 (YSPL-1). ).
          Length = 194

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 209 TVEVVPRRGDVDSEASMIPALCRHSSCHG-KHW 114
           T + +PR       +S++  LCR  SCHG  HW
Sbjct: 68  TSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHW 100


>AK055730-1|BAB70999.1|  212|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31168 fis, clone KIDNE1000152, moderately
           similar to Mus musculus yolk sac permease-like molecule
           1 (YSPL-1) ).
          Length = 212

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 209 TVEVVPRRGDVDSEASMIPALCRHSSCHG-KHW 114
           T + +PR       +S++  LCR  SCHG  HW
Sbjct: 95  TSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHW 127


>BC084553-1|AAH84553.1|  371|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-asparate-associated protein 1
           (gluta protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 128 GKSYVGKAQESLRLQNRHHHDEGPPQPFDNLPFKFTN 238
           G+  V   Q+    Q+ ++ +EGPP  +DN  F  TN
Sbjct: 115 GQPQVFPGQDPDSPQHGNYQEEGPPSYYDNQDFPATN 151


>BC041788-1|AAH41788.2|  371|Homo sapiens glutamate receptor,
           ionotropic, N-methyl D-asparate-associated protein 1
           (gluta protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 128 GKSYVGKAQESLRLQNRHHHDEGPPQPFDNLPFKFTN 238
           G+  V   Q+    Q+ ++ +EGPP  +DN  F  TN
Sbjct: 115 GQPQVFPGQDPDSPQHGNYQEEGPPSYYDNQDFPATN 151


>AB097026-1|BAC77379.1|  371|Homo sapiens putative MAPK activating
           protein protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 128 GKSYVGKAQESLRLQNRHHHDEGPPQPFDNLPFKFTN 238
           G+  V   Q+    Q+ ++ +EGPP  +DN  F  TN
Sbjct: 115 GQPQVFPGQDPDSPQHGNYQEEGPPSYYDNQDFPATN 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,410,849
Number of Sequences: 237096
Number of extensions: 1034787
Number of successful extensions: 2046
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)