Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b16
(400 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 5.0
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 5.0
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 5.0
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 5.0
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z66519-5|CAA91382.2| 500|Caenorhabditis elegans Hypothetical pr... 27 6.5
U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid sphingomye... 27 6.5
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 27 6.5
Z81137-1|CAB03469.2| 503|Caenorhabditis elegans Hypothetical pr... 26 8.7
U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical pr... 26 8.7
>Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical
protein F26E4.6 protein.
Length = 84
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 218 LPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 325
LPF TN++ F GFWAPFI++ Y + K
Sbjct: 46 LPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRK 81
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 32 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 66
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 32 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 66
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 241
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z66519-5|CAA91382.2| 500|Caenorhabditis elegans Hypothetical
protein B0334.5 protein.
Length = 500
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 203 QPFDNLPFKFTNRYVATLVFSIFFGTGFWA-PFIIL 307
QPF NLP + V +L+ ++ +GT F A PF+ +
Sbjct: 36 QPFINLPSDVVAQTVISLI-ALIYGTSFLANPFLFI 70
>U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid
sphingomyelinase protein 1 protein.
Length = 564
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 336 HNDFFAMEYHNMINGAQKPVPKKIENTNVATYRF 235
H D+F + Y +M N + KP+ + +V T+ +
Sbjct: 417 HLDYFTVFYEDMHNVSSKPISVGYASPSVTTFEY 450
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 137 YVGKAQESLRLQNRHHHDEGPPQPFDNLP 223
YVGK+ SL RH H Q D P
Sbjct: 28 YVGKSDRSLSAHKRHRHPRPEGQEDDKKP 56
>Z81137-1|CAB03469.2| 503|Caenorhabditis elegans Hypothetical
protein W02D9.1 protein.
Length = 503
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 41 KSLNSISLLDYNNYITMSRLRALFANAFRGKSYVGKAQESLRLQNRHHHDE 193
+S +++L+ + + RL L NA+ GK Y G+ + + RH D+
Sbjct: 251 RSFKHLAILEEEGRL-LPRLSLLSNNAYSGKDYNGEQPDGSIIVTRHMIDK 300
>U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical
protein R09F10.3 protein.
Length = 468
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = +1
Query: 247 SNISIFNLL-RNRFL-GTIYHIVVLHGK 324
+NI +FN +NR+ GT++H + L+GK
Sbjct: 400 ANIHLFNCFAQNRWTAGTLFHFISLYGK 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,656,424
Number of Sequences: 27780
Number of extensions: 169478
Number of successful extensions: 500
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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