Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b14
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC120989-1|AAI20990.1| 424|Homo sapiens tubulin folding cofacto... 59 1e-08
BC120988-1|AAI20989.1| 424|Homo sapiens tubulin folding cofacto... 59 1e-08
AY398644-1|AAR27875.1| 424|Homo sapiens tubulin-specific chaper... 59 1e-08
U61232-1|AAB17538.1| 527|Homo sapiens cofactor E protein. 36 0.086
BT007086-1|AAP35749.1| 527|Homo sapiens tubulin-specific chaper... 36 0.086
BC008654-1|AAH08654.1| 527|Homo sapiens tubulin folding cofacto... 36 0.086
AL672237-1|CAH72080.1| 527|Homo sapiens tubulin folding cofacto... 36 0.086
AL357556-2|CAI15017.1| 527|Homo sapiens tubulin folding cofacto... 36 0.086
BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat con... 36 0.11
AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens ... 36 0.11
AK057238-1|BAB71392.1| 418|Homo sapiens protein ( Homo sapiens ... 36 0.11
Z81367-2|CAI42027.1| 409|Homo sapiens nuclear RNA export factor... 35 0.20
Z81367-1|CAI42026.1| 626|Homo sapiens nuclear RNA export factor... 35 0.20
BC131708-1|AAI31709.1| 365|Homo sapiens NXF5 protein protein. 35 0.20
BC015020-1|AAH15020.1| 626|Homo sapiens nuclear RNA export fact... 35 0.20
AL672207-5|CAI42478.1| 302|Homo sapiens nuclear RNA export fact... 35 0.20
AL672207-4|CAI42477.1| 368|Homo sapiens nuclear RNA export fact... 35 0.20
AL672207-3|CAI42476.1| 305|Homo sapiens nuclear RNA export fact... 35 0.20
AL672207-2|CAI42475.1| 397|Homo sapiens nuclear RNA export fact... 35 0.20
AL590069-2|CAD13494.1| 626|Homo sapiens nuclear RNA export fact... 35 0.20
AL590069-1|CAI40394.1| 409|Homo sapiens nuclear RNA export fact... 35 0.20
AL157436-1|CAB75659.1| 409|Homo sapiens hypothetical protein pr... 35 0.20
AK000423-1|BAA91154.1| 515|Homo sapiens protein ( Homo sapiens ... 35 0.20
AJ277659-1|CAC20433.1| 626|Homo sapiens nuclear RNA export fact... 35 0.20
AJ277658-1|CAC20432.1| 302|Homo sapiens nuclear RNA export fact... 35 0.20
AJ277657-1|CAC20431.1| 305|Homo sapiens nuclear RNA export fact... 35 0.20
AJ277655-1|CAC20429.1| 368|Homo sapiens nuclear RNA export fact... 35 0.20
AJ277654-1|CAC20428.1| 397|Homo sapiens nuclear RNA export fact... 35 0.20
AJ277526-1|CAC16588.1| 626|Homo sapiens nuclear RNA export fact... 35 0.20
AF285596-1|AAK31975.1| 560|Homo sapiens nuclear export factor 2... 35 0.20
U80073-1|AAB81111.1| 559|Homo sapiens tip associating protein p... 35 0.26
BC028041-1|AAH28041.1| 619|Homo sapiens nuclear RNA export fact... 35 0.26
BC004904-1|AAH04904.1| 619|Homo sapiens nuclear RNA export fact... 35 0.26
AJ132712-1|CAA10753.1| 619|Homo sapiens nuclear RNA export fact... 35 0.26
AF126246-1|AAD20016.1| 619|Homo sapiens tip-associated protein ... 35 0.26
AF112880-1|AAD39102.1| 619|Homo sapiens tip associating protein... 35 0.26
AB209915-1|BAD93152.1| 369|Homo sapiens nuclear RNA export fact... 35 0.26
AK124700-1|BAC85929.1| 333|Homo sapiens protein ( Homo sapiens ... 33 1.1
>BC120989-1|AAI20990.1| 424|Homo sapiens tubulin folding cofactor
E-like protein.
Length = 424
Score = 59.3 bits (137), Expect = 1e-08
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +3
Query: 366 PKRSP---RLSVPTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILE 536
P+ SP RL++P++LVLN CA V ELDL++NKL +W EV I+
Sbjct: 38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVS 97
Query: 537 QTPRVRFLNLSFNRLSAQI 593
P++ FLNLS N L+ +
Sbjct: 98 NVPQLEFLNLSSNPLNLSV 116
>BC120988-1|AAI20989.1| 424|Homo sapiens tubulin folding cofactor
E-like protein.
Length = 424
Score = 59.3 bits (137), Expect = 1e-08
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +3
Query: 366 PKRSP---RLSVPTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILE 536
P+ SP RL++P++LVLN CA V ELDL++NKL +W EV I+
Sbjct: 38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVS 97
Query: 537 QTPRVRFLNLSFNRLSAQI 593
P++ FLNLS N L+ +
Sbjct: 98 NVPQLEFLNLSSNPLNLSV 116
>AY398644-1|AAR27875.1| 424|Homo sapiens tubulin-specific chaperone
cofactor E-like protein protein.
Length = 424
Score = 59.3 bits (137), Expect = 1e-08
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +3
Query: 366 PKRSP---RLSVPTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILE 536
P+ SP RL++P++LVLN CA V ELDL++NKL +W EV I+
Sbjct: 38 PQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVS 97
Query: 537 QTPRVRFLNLSFNRLSAQI 593
P++ FLNLS N L+ +
Sbjct: 98 NVPQLEFLNLSSNPLNLSV 116
>U61232-1|AAB17538.1| 527|Homo sapiens cofactor E protein.
Length = 527
Score = 36.3 bits (80), Expect = 0.086
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL 191
>BT007086-1|AAP35749.1| 527|Homo sapiens tubulin-specific chaperone
e protein.
Length = 527
Score = 36.3 bits (80), Expect = 0.086
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL 191
>BC008654-1|AAH08654.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 36.3 bits (80), Expect = 0.086
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL 191
>AL672237-1|CAH72080.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 36.3 bits (80), Expect = 0.086
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL 191
>AL357556-2|CAI15017.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 36.3 bits (80), Expect = 0.086
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
C ++ ++DL+ N L+ W EV I +Q + LN+S N+L
Sbjct: 152 CPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKL 191
>BC024009-1|AAH24009.3| 725|Homo sapiens leucine rich repeat
containing 50 protein.
Length = 725
Score = 35.9 bits (79), Expect = 0.11
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 459 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
+C + LDL++NKL++ E+ +ILE P +R LNL N + QI
Sbjct: 218 ECLRLCVLDLSHNKLSD-PEILSILESMPDLRVLNLMGNPVIRQI 261
>AK058059-1|BAB71645.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ25330 fis, clone TST00576. ).
Length = 524
Score = 35.9 bits (79), Expect = 0.11
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 459 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
+C + LDL++NKL++ E+ +ILE P +R LNL N + QI
Sbjct: 17 ECLRLCVLDLSHNKLSD-PEILSILESMPDLRVLNLMGNPVIRQI 60
>AK057238-1|BAB71392.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ32676 fis, clone TESTI1000168, weakly similar to
PROTEIN PHOSPHATASES PP1 REGULATORY SUBUNIT SDS22. ).
Length = 418
Score = 35.9 bits (79), Expect = 0.11
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 459 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
+C + LDL++NKL++ E+ +ILE P +R LNL N + QI
Sbjct: 218 ECLRLCVLDLSHNKLSD-PEILSILESMPDLRVLNLMGNPVIRQI 261
>Z81367-2|CAI42027.1| 409|Homo sapiens nuclear RNA export factor 2
protein.
Length = 409
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 183 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 222
>Z81367-1|CAI42026.1| 626|Homo sapiens nuclear RNA export factor 2
protein.
Length = 626
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 310
>BC131708-1|AAI31709.1| 365|Homo sapiens NXF5 protein protein.
Length = 365
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 199
>BC015020-1|AAH15020.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 310
>AL672207-5|CAI42478.1| 302|Homo sapiens nuclear RNA export factor
5 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 136
>AL672207-4|CAI42477.1| 368|Homo sapiens nuclear RNA export factor
5 protein.
Length = 368
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 199
>AL672207-3|CAI42476.1| 305|Homo sapiens nuclear RNA export factor
5 protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 136
>AL672207-2|CAI42475.1| 397|Homo sapiens nuclear RNA export factor
5 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 199
>AL590069-2|CAD13494.1| 626|Homo sapiens nuclear RNA export factor
2B protein.
Length = 626
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 310
>AL590069-1|CAI40394.1| 409|Homo sapiens nuclear RNA export factor
2B protein.
Length = 409
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 183 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 222
>AL157436-1|CAB75659.1| 409|Homo sapiens hypothetical protein
protein.
Length = 409
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 183 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 222
>AK000423-1|BAA91154.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ20416 fis, clone KAT02203. ).
Length = 515
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 199
>AJ277659-1|CAC20433.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 310
>AJ277658-1|CAC20432.1| 302|Homo sapiens nuclear RNA export factor
5 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 136
>AJ277657-1|CAC20431.1| 305|Homo sapiens nuclear RNA export factor
5 protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 97 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 136
>AJ277655-1|CAC20429.1| 368|Homo sapiens nuclear RNA export factor
5 protein.
Length = 368
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 199
>AJ277654-1|CAC20428.1| 397|Homo sapiens nuclear RNA export factor
5 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 160 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 199
>AJ277526-1|CAC16588.1| 626|Homo sapiens nuclear RNA export factor
2 protein.
Length = 626
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 271 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 310
>AF285596-1|AAK31975.1| 560|Homo sapiens nuclear export factor 2
protein.
Length = 560
Score = 35.1 bits (77), Expect = 0.20
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L NNKL + + I E+ P+V+ LNLS N+L +
Sbjct: 205 ELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLES 244
>U80073-1|AAB81111.1| 559|Homo sapiens tip associating protein
protein.
Length = 559
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 206 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 246
>BC028041-1|AAH28041.1| 619|Homo sapiens nuclear RNA export factor
1 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>BC004904-1|AAH04904.1| 619|Homo sapiens nuclear RNA export factor
1 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AJ132712-1|CAA10753.1| 619|Homo sapiens nuclear RNA export factor
1 protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AF126246-1|AAD20016.1| 619|Homo sapiens tip-associated protein TAP
protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AF112880-1|AAD39102.1| 619|Homo sapiens tip associating protein
protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 266 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 306
>AB209915-1|BAD93152.1| 369|Homo sapiens nuclear RNA export factor
1 variant protein.
Length = 369
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQ 590
+++ L+L+NN+L ++ +I+++ P ++ LNLS N L ++
Sbjct: 279 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 319
>AK124700-1|BAC85929.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ42710 fis, clone BRAMY3007609, moderately
similar to Homo sapiens nuclear RNA export factor 2
(NXF2). ).
Length = 333
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSA 587
+++ L+L +NKL + I+E+ P+V+ LNLS N+L +
Sbjct: 99 ELLSLNLCDNKLYHLDGLPDIIEKAPKVKTLNLSKNKLKS 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,527,790
Number of Sequences: 237096
Number of extensions: 1378150
Number of successful extensions: 1861
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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