Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b14
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64598-4|AAN72420.1|  418|Caenorhabditis elegans Hypothetical pr...    38   0.008
U64598-3|AAK39213.1|  432|Caenorhabditis elegans Hypothetical pr...    38   0.008
AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical...    35   0.053
U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   2.0  
U29613-1|AAC47060.1|   94|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.0  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.0  

>U64598-4|AAN72420.1|  418|Caenorhabditis elegans Hypothetical
           protein C52B9.3b protein.
          Length = 418

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 399 LLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNR 578
           LLVLN                 + V E DL  N++++W ++  IL+  P +R LN+  N 
Sbjct: 48  LLVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHLRVLNIGHNP 107

Query: 579 LSAQI 593
           L+  I
Sbjct: 108 LNPVI 112


>U64598-3|AAK39213.1|  432|Caenorhabditis elegans Hypothetical
           protein C52B9.3a protein.
          Length = 432

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 399 LLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNR 578
           LLVLN                 + V E DL  N++++W ++  IL+  P +R LN+  N 
Sbjct: 48  LLVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHLRVLNIGHNP 107

Query: 579 LSAQI 593
           L+  I
Sbjct: 108 LNPVI 112


>AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical
           protein K07H8.1 protein.
          Length = 493

 Score = 34.7 bits (76), Expect = 0.053
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +3

Query: 477 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
           EL+L  N L +W+ V  ILE  PR++ LNL  NR+
Sbjct: 146 ELNLYGNLLYKWKTVRQILEYFPRIQELNLRRNRM 180


>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 361 NMATGMSSIDGFTSPLAPYLRSRASKSDGMTAALIKNHWKQRVF 230
           +M  G S  DG +SP    LRSR+  +D   A L +NH+K+  F
Sbjct: 205 SMNNGGSGSDGKSSPDWRPLRSRSFLNDSQVAVL-QNHFKRNPF 247


>U29613-1|AAC47060.1|   94|Caenorhabditis elegans Hypothetical
           protein K02A6.1 protein.
          Length = 94

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 250 HWKQRVFFLNINSILKLFRLKSYKIFTVSIFLHKQLITFFSK 125
           H+K+  FF     IL+ F   S  I  +SIF  K L T +SK
Sbjct: 35  HFKRNCFFSPAQCILENFPKSSNLIPMLSIFEDKSLTTIYSK 76


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 361 NMATGMSSIDGFTSPLAPYLRSRASKSDGMTAALIKNHWKQRVF 230
           +M  G S  DG +SP    LRSR+  +D   A L +NH+K+  F
Sbjct: 205 SMNNGGSGSDGKSSPDWRPLRSRSFLNDSQVAVL-QNHFKRNPF 247


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 361 NMATGMSSIDGFTSPLAPYLRSRASKSDGMTAALIKNHWKQRVF 230
           +M  G S  DG +SP    LRSR+  +D   A L +NH+K+  F
Sbjct: 205 SMNNGGSGSDGKSSPDWRPLRSRSFLNDSQVAVL-QNHFKRNPF 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,380,246
Number of Sequences: 27780
Number of extensions: 229871
Number of successful extensions: 499
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)