Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b14
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferlin... 44 8e-05
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 30 1.4
At3g56100.1 68416.m06235 leucine-rich repeat transmembrane prote... 29 1.9
At5g65830.1 68418.m08284 leucine-rich repeat family protein cont... 29 2.4
At4g20790.1 68417.m03018 leucine-rich repeat family protein cont... 29 3.2
At3g47570.1 68416.m05179 leucine-rich repeat transmembrane prote... 29 3.2
At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put... 29 3.2
At3g08680.2 68416.m01009 leucine-rich repeat transmembrane prote... 28 4.3
At3g08680.1 68416.m01008 leucine-rich repeat transmembrane prote... 28 4.3
At2g24130.1 68415.m02883 leucine-rich repeat transmembrane prote... 28 4.3
At3g51740.1 68416.m05673 leucine-rich repeat transmembrane prote... 28 5.7
At1g04210.1 68414.m00411 leucine-rich repeat family protein / pr... 28 5.7
At5g16900.1 68418.m01981 leucine-rich repeat protein kinase, put... 27 7.5
At5g01890.1 68418.m00108 leucine-rich repeat transmembrane prote... 27 7.5
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 27 7.5
At1g07390.1 68414.m00788 leucine-rich repeat family protein cont... 27 7.5
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 9.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 9.9
At2g24230.1 68415.m02894 leucine-rich repeat transmembrane prote... 27 9.9
At1g09970.2 68414.m01124 leucine-rich repeat transmembrane prote... 27 9.9
At1g09970.1 68414.m01123 leucine-rich repeat transmembrane prote... 27 9.9
>At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferling
(PFI) almost identical to tubulin folding cofactor E
(Pfifferling; PFI) GI:20514267 from [Arabidopsis
thaliana]; identical to cDNA tubulin folding cofactor E,
GI:20514266
Length = 531
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +3
Query: 480 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQSLR 614
LDL N +++W+E+ A+ EQ P + LNLS N LS+ I++ L+
Sbjct: 165 LDLTGNLISDWEEIGALCEQLPALTTLNLSCNSLSSDIKSLPQLK 209
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Frame = +3
Query: 318 GEVNPSIDDMPVAIFVPKRSPRLS--VP-------TLLVLNXXXXXXXXXXXXXXXKCAD 470
GE++P+I D+ + + R RLS +P +L L+ K
Sbjct: 82 GEISPAIGDLKSLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQ 141
Query: 471 VVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
+ +L L NN+L + + L Q P ++ L+L+ N+LS +I
Sbjct: 142 LEQLILKNNQLI--GPIPSTLSQIPNLKILDLAQNKLSGEI 180
>At3g56100.1 68416.m06235 leucine-rich repeat transmembrane protein
kinase, putative hypothetical proteins - Arabidopsis
thaliana
Length = 719
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 480 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAAQS 608
LDL+NN L+E + L + ++ LNLSFN LS QI + S
Sbjct: 178 LDLSNNLLSEI--IPPNLADSSKLLRLNLSFNSLSGQIPVSLS 218
>At5g65830.1 68418.m08284 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to receptor
protein kinase-like protein
Length = 279
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
C ++ LDL++N+++ E+ L+ + LNLS NRLS QI
Sbjct: 103 CTNLQSLDLSSNQISG--EIPPQLQFFVNLAVLNLSSNRLSGQI 144
>At4g20790.1 68417.m03018 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains,
Pfam:PF00560;
Length = 518
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS 584
CA + LDL+ N+ + + V L P + LNLS+NR S
Sbjct: 144 CAQIRTLDLSYNQFSGFVPV-QDLSGLPNLTHLNLSYNRFS 183
>At3g47570.1 68416.m05179 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21 - Oryza sativa,
PIR:A57676
Length = 1010
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 471 VVELDLANNKLT-EWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
V E+DL+NN L+ E FA ++ +LNLSFN L ++
Sbjct: 554 VKEVDLSNNDLSGSIPEYFASFS---KLEYLNLSFNNLEGKV 592
>At2g28990.1 68415.m03526 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 393 PTLLVLNXXXXXXXXXXXXXXXKCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSF 572
PT++ L+ + ELDL+NN LT +F L + +NLS
Sbjct: 405 PTIISLDLSKSGLNGSIPQILQNFTQLQELDLSNNSLTGPVPIF--LANMKTLSLINLSG 462
Query: 573 NRLSAQIQAA 602
N LS + A
Sbjct: 463 NNLSGSVPQA 472
>At3g08680.2 68416.m01009 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: PF00069
Eukaryotic protein kinase domain, PF00560 leucine Rich
Repeat (5 copies)
Length = 640
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 471 VVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAA 602
+ +L L NN L+ I PR+++LNLSFN L+ + ++
Sbjct: 164 LTDLSLQNNSLSG-----PIPNLPPRLKYLNLSFNNLNGSVPSS 202
>At3g08680.1 68416.m01008 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: PF00069
Eukaryotic protein kinase domain, PF00560 leucine Rich
Repeat (5 copies)
Length = 640
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 471 VVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAA 602
+ +L L NN L+ I PR+++LNLSFN L+ + ++
Sbjct: 164 LTDLSLQNNSLSG-----PIPNLPPRLKYLNLSFNNLNGSVPSS 202
>At2g24130.1 68415.m02883 leucine-rich repeat transmembrane protein
kinase, putative
Length = 980
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 459 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
KC ++ LDL++N LT V + +LNLS N LS I
Sbjct: 415 KCINLEILDLSHNNLTGTIPVEVVSNLRNLKLYLNLSSNHLSGPI 459
>At3g51740.1 68416.m05673 leucine-rich repeat transmembrane protein
kinase, putative brassinosteroid-insensitive protein
BRI1 - Arabidopsis thaliana, PIR:T09356
Length = 836
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
C + LDL++N+LT + L ++ R+ LNLSFN LS +
Sbjct: 165 CPLLQNLDLSSNQLTG--AIPPSLTESTRLYRLNLSFNSLSGPL 206
>At1g04210.1 68414.m00411 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1112
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 480 LDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRL 581
LD++NN+LT + L PR++ LNL +N+L
Sbjct: 227 LDVSNNRLTTLHPLD--LNLMPRLQILNLRYNKL 258
>At5g16900.1 68418.m01981 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 866
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3
Query: 477 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQIQAA 602
+LDL+NNKLT F L + F+NLS N L I A
Sbjct: 442 KLDLSNNKLTGGVPEF--LANMKSLLFINLSNNNLVGSIPQA 481
>At5g01890.1 68418.m00108 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich receptor-like protein
(LRPKm1) - Malus domestica, EMBL:AF053127
Length = 967
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 459 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
+C + + LANNKLT + L + LNLS N+LS ++
Sbjct: 139 QCGSLRSVSLANNKLT--GSIPVSLSYCSTLTHLNLSSNQLSGRL 181
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 477 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
ELDL+NNKL+ + ++L+ T + FL+L FN S +
Sbjct: 228 ELDLSNNKLS-GEFPSSVLKAT-NLTFLDLRFNSFSGSV 264
>At1g07390.1 68414.m00788 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 976
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 459 KCADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
K + LDL+NNKL + L + +LN+S+N LS +I
Sbjct: 855 KLKGLESLDLSNNKLDG--SIPPALADLNSLGYLNISYNNLSGEI 897
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 477 ELDLANNKLTEWQEVF-AILEQTPRVRFLNLSFNRLSAQI 593
ELDL+NN+ +F ++ Q P ++FL+L FN +
Sbjct: 178 ELDLSNNRFAG---IFPTVVLQLPSLKFLDLRFNEFEGPV 214
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 477 ELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI 593
ELDL+NN+ + ++ Q P ++FL+L FN +
Sbjct: 166 ELDLSNNRFAG--KFPTVVLQLPSLKFLDLRFNEFEGTV 202
>At2g24230.1 68415.m02894 leucine-rich repeat transmembrane protein
kinase, putative
Length = 853
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 468 DVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLS 584
++V +D++ N LT + +ILE+ P + N SFN L+
Sbjct: 376 NLVAIDVSRNNLTG-EIPMSILEKLPWMERFNFSFNNLT 413
>At1g09970.2 68414.m01124 leucine-rich repeat transmembrane protein
kinase, putative Similar to A. thaliana receptor-like
protein kinase (gb|RLK5_ARATH). ESTs
gb|ATTS0475,gb|ATTS4362 come from this gene isoform
contains a TG acceptor site at intron.
Length = 977
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI-QAAQSLR 614
C+ + ++++A N ++ E+ L P + LNLS N+LS +I ++ SLR
Sbjct: 505 CSMLSDVNMAQNSISG--EIPHTLGSLPTLNALNLSDNKLSGRIPESLSSLR 554
>At1g09970.1 68414.m01123 leucine-rich repeat transmembrane protein
kinase, putative Similar to A. thaliana receptor-like
protein kinase (gb|RLK5_ARATH). ESTs
gb|ATTS0475,gb|ATTS4362 come from this gene isoform
contains a TG acceptor site at intron.
Length = 976
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 462 CADVVELDLANNKLTEWQEVFAILEQTPRVRFLNLSFNRLSAQI-QAAQSLR 614
C+ + ++++A N ++ E+ L P + LNLS N+LS +I ++ SLR
Sbjct: 505 CSMLSDVNMAQNSISG--EIPHTLGSLPTLNALNLSDNKLSGRIPESLSSLR 554
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,471,478
Number of Sequences: 28952
Number of extensions: 205438
Number of successful extensions: 556
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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