Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b13
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.69 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.69 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.8  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   3.7  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   3.7  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   3.7  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   3.7  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   3.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   3.7  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   3.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   3.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   3.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 285 SPCPCPCQGPYVWSSGIDRCCW 220
           S C  PC+   +     D CCW
Sbjct: 447 SACSLPCEPGMIKKQQGDTCCW 468


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 285 SPCPCPCQGPYVWSSGIDRCCW 220
           S C  PC+   +     D CCW
Sbjct: 537 SACSLPCEPGMIKKQQGDTCCW 558


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 444 PPSCTRTGGRSLLYHSRSSRACEPLAIRF 358
           PPS  R+      Y + SSR+ +P A ++
Sbjct: 58  PPSIDRSSIHEESYLAESSRSIDPCASKY 86


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 70  RRERGRSREHRIIP 83


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 303 RRERGRSREHRIIP 316


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 RRERNTNQQHRSIP 241
           RRER  +++HR IP
Sbjct: 319 RRERGRSREHRIIP 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,873
Number of Sequences: 438
Number of extensions: 2718
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)