Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b12
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 232 2e-61
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 73 3e-13
SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 52 4e-07
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 43 3e-04
SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 36 0.044
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076
SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_28781| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 3.8
SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2) 29 3.8
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 28 6.6
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 232 bits (567), Expect = 2e-61
Identities = 117/188 (62%), Positives = 136/188 (72%), Gaps = 2/188 (1%)
Frame = +3
Query: 162 SATSQASIKFYSTA--SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVND 335
SA+S + + +A SYE+I E G NVG IQLNRPKALNALC L EL A++
Sbjct: 20 SASSLRYTRAFCSAKKSYEHILTETKGESNNVGFIQLNRPKALNALCNDLMYELSDALDA 79
Query: 336 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVN 515
F+AD N+ I++TG +AFAAGADIKEMQ TY FL W +S C KP+IAAVN
Sbjct: 80 FEADKNVGCIVLTGCGRAFAAGADIKEMQPLTYQKCLSGDFLGHWTRVSKCTKPVIAAVN 139
Query: 516 GFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTG 695
GFALGGGCELAM+CDIIYA +KAKFGQPEI IGTIPGAGGTQRL R VGKS AME+VLTG
Sbjct: 140 GFALGGGCELAMMCDIIYASDKAKFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTG 199
Query: 696 NFFDAHEA 719
+ +A A
Sbjct: 200 DPINADHA 207
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 91.5 bits (217), Expect = 6e-19
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Frame = +3
Query: 240 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEM 419
K V ++ + RP+ NA+ +L + F+ D ++ ++TG F AG+D++E+
Sbjct: 35 KGKVLVVSIARPEKRNAINSETADQLSETFRHFEIDDSVNVAVLTGKGGNFCAGSDLQEL 94
Query: 420 QNNTYSSNTKQGFLREWED--ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFG 593
+ K + D ++ +P+I A+ G+A+GGG ELA+LCD+ E + FG
Sbjct: 95 AQKDAETYMKSFYPPGEGDGPMAEANQPVIGAIQGYAVGGGLELALLCDLRVCEEDSVFG 154
Query: 594 QPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
G GG RLP +G S+A+++++TG A EA
Sbjct: 155 FFNRRFGVPLVDGGAVRLPYLIGLSRALDLIMTGRAVKAQEA 196
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +3
Query: 492 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAK--FGQPEINIGTIPGAGGTQRLPRYVGK 665
KP++AA+ G +GGG ELA+ C A K PE+ +G +PGAGGTQRLPR VG
Sbjct: 4 KPVVAAIMGTCMGGGLELALSCHYRIAVNDGKTVLSAPEVMLGLLPGAGGTQRLPRLVGL 63
Query: 666 SKAMEIVLTGNFFDAHEA 719
+++++LTG A +A
Sbjct: 64 PDSLDMMLTGKNIRAQKA 81
>SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 63.7 bits (148), Expect = 1e-10
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Frame = +3
Query: 201 ASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN 380
+ Y+ I+V K + I+LNRPK NA+ ++ E A+++ S+ ++TG
Sbjct: 68 SQYKEIEVTY---KDGIQTIKLNRPKKYNAITWEMYQEWINALDEGAKSSSCVVTLVTGA 124
Query: 381 EKAFAAGADIKEMQNNTYSSNTKQG-----FLREWED-ISNCGKPIIAAVNGFALGGGCE 542
+ +G D+ K LR++ + KP++AA+NG A+G
Sbjct: 125 GDYYCSGNDLSNFAKIPPEGPEKMARAGREVLRKFVSAFIDYPKPLVAAINGPAVGISVT 184
Query: 543 LAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
+ L D+++A ++A F P + +G P + P +G S A +++L A EA
Sbjct: 185 VLGLFDLVFATDRATFHTPFMELGQSPEGCSSFTFPAIMGPSLANQVLLASRKLTAAEA 243
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 63.3 bits (147), Expect = 2e-10
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Frame = +3
Query: 285 NALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEM--QNNTYSSNTK--- 449
NAL + +L A+++ D ++ ++I G K F +G D + + NTK
Sbjct: 272 NALTIEMCEQLVAALHEASKD-DVNVVVIIGAGKYFCSGLDYTCVFTRGPQQKQNTKLLV 330
Query: 450 QGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGA 629
+ F E I +C KPIIAAVNG A G G L LCDI+Y EK G P
Sbjct: 331 ERFKLLVEVIIHCSKPIIAAVNGDAKGFGTSLVALCDIVYVCEKINLELSFTKWGHTPIG 390
Query: 630 GGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
T LP+ VG + A ++L A +A
Sbjct: 391 CCTYTLPQAVGHAGAYGMLLFSTKMSAEDA 420
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +3
Query: 390 FAAGADIKEMQNNTYSS--NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDI 563
F AG D+KE+ S ++ F W + +AA+ G A+ GGC L++ CD
Sbjct: 1478 FCAGLDLKEVLALRKSKLVTFRKTFQDMWSRLYGSRLVTMAAIKGHAIAGGCVLSLACDY 1537
Query: 564 IYAGEKAKFGQPEINIGT--IPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
+ G PE+++G P GT L VG+++A +I+ FDA +A
Sbjct: 1538 SVMASDFRIGLPELSLGLYFAPWMAGT--LSNAVGRNRAEKIIYNAQVFDADDA 1589
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 56.8 bits (131), Expect = 2e-08
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Frame = +3
Query: 276 KALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGAD-IKEMQNNTYSSNTK 449
K +N+ E+ + D +++++ +I+T + K F+AG D +KE+ Y S+ K
Sbjct: 6 KPVNSFSLEFLEEIHDTLEDLESNTDCRGLIVTSSMPKVFSAGLDLVKEL----YKSDEK 61
Query: 450 QGFL--REWEDI--SNCGKPI--IAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINI 611
+ F+ R ++D+ G + +AAVNG A+ GGC LA CD G E +
Sbjct: 62 RLFVFWRRFQDVWMQLYGSRLATVAAVNGHAVAGGCLLAAACDYRLMAANFTIGMNETIV 121
Query: 612 GTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
G +Q + VG S I G A EA
Sbjct: 122 GIAIPFWISQNIVNLVGTSTGERICALGTMLSAEEA 157
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 53.6 bits (123), Expect = 2e-07
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Frame = +3
Query: 177 ASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVEL-GKAVNDFDADSN 353
+S++F+ SY N K + I LN PK NAL + + ++D
Sbjct: 9 SSLEFFM--SYGNRKWSP-SQDNGIRRIVLNNPKKRNALSLAMLEAIRSDLLHDLQG--- 62
Query: 354 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGG 533
I+ I+++ N F++G D+KE+ +I G A
Sbjct: 63 ISVIVLSANGPVFSSGHDLKEL--------------------------LILLSTGLATAA 96
Query: 534 GCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAH 713
GC+L CD+ A +K++F P +NIG G L R V + AME++LTG A
Sbjct: 97 GCQLVASCDVAVASDKSQFATPGVNIGLFCSTPGV-ALARAVPRKVAMEMLLTGRPITAG 155
Query: 714 EA 719
EA
Sbjct: 156 EA 157
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +3
Query: 477 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 656
I C KP+IAAV+ +GGG ++ CDI A F E+ +G G QR+P+
Sbjct: 35 IEKCEKPVIAAVHSACVGGGVDMICACDIRLCTSDAWFQVKEVELGLAADVGTLQRMPKI 94
Query: 657 VGKSKAM 677
VG +
Sbjct: 95 VGNESGI 101
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Frame = +3
Query: 261 QLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQN-NTYS 437
QL A NAL + V L + V++ + A+I+ G+ F +G D+ ++ +T
Sbjct: 891 QLAGIAARNALTGHMMVRLAEVVDELEKWQAGKALILHGDAGTFVSGGDLSVLKEIHTPG 950
Query: 438 SNTKQGFL--REWEDISNCGKPIIAAVNGFALGGGCEL-------AMLCDIIYAGEK--A 584
+ + + + + +AA+ G A+GGG E + E +
Sbjct: 951 EGEQMCYFMHKTFARLQRLPLISLAAIQGLAIGGGAEAHTQGGAGGVNAPPHTTAESPFS 1010
Query: 585 KFGQPEI-----NIGTIPGAGGTQRLPRYVGKSKAMEIVL 689
+PEI +G PG GG RL + VG+ KAMEI+L
Sbjct: 1011 VLNRPEIKFVQARMGLTPGWGGGARLVQLVGRQKAMEILL 1050
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 492 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 590
KP+I A+ G+A+GGG ELA+LCD+ E + F
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCDLRVCEEDSVF 390
>SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +3
Query: 258 IQLNRPKALNALCKPLFVELGKAVNDFDADSNI-AAIIITGNEKAFAAGADI---KEMQN 425
++LNR +PL + L K + + + ++ +++++ + AGADI K +N
Sbjct: 49 VKLNRDGIYGIRQQPL-LPLRKVMQEITHNPDVKCSVLMSAKPGCWIAGADINMLKAGEN 107
Query: 426 NTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCE 542
+ +G + ++ + + KP++AA+ G +GGG E
Sbjct: 108 AAQVTEIAKGGQQVYQFLEDSPKPVVAAIMGTCMGGGLE 146
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 570 AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTG 695
A EK F PE IG P GG LPR GK + + LTG
Sbjct: 134 ATEKTTFAMPETAIGFFPDVGGAHALPRLSGK-LGLFLALTG 174
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 237 SKKNVGLIQLNRPKALNALCKPL 305
+K N G+I +NRPKALNAL P+
Sbjct: 90 TKNNAGIITMNRPKALNALNLPM 112
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 34.7 bits (76), Expect = 0.076
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 471 EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQR-L 647
+ I + KPI+A ++ A G G +L +CD++ ++A G P I++ + G
Sbjct: 581 QTIQHFPKPIVATISKPAHGLGAQLVAMCDMVC--DEASLGSP-IDVASAKANGIVPYCF 637
Query: 648 PRYVGKSKAMEIVLTG 695
PR +G S E +L G
Sbjct: 638 PRLMGHSAVSEQLLMG 653
>SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 677 HCFRLANVSGKTLGASGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTSKSETINS 507
HC+ ++N T+GA G G + L +T RL D+ +HC L + + TI
Sbjct: 80 HCYLVSNAYPSTIGAKGFDIGDSALLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 137
Query: 506 GNDGLPTVGD--VLPFT 462
G G VGD +LP T
Sbjct: 138 GAKGF-DVGDSALLPVT 153
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 677 HCFRLANVSGKTLGASGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTSKSETINS 507
HC+ ++N T+GA G G + L +T RL D+ +HC L + + TI
Sbjct: 125 HCYLVSNAYPSTIGAKGFDVGDSALLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 182
Query: 506 GNDGLPTVGD--VLPFT 462
G G VGD +LP T
Sbjct: 183 GAKGF-DVGDSALLPVT 198
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 677 HCFRLANVSGKTLGASGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTSKSETINS 507
HC+ ++N T+GA G G + L +T RL D+ +HC L + + TI
Sbjct: 35 HCYLVSNAYPSTVGAKGFDVGDSTLLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 92
Query: 506 GNDGLPTVGD--VLPFT 462
G G +GD +LP T
Sbjct: 93 GAKGF-DIGDSALLPVT 108
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -3
Query: 677 HCFRLANVSGKTLGASGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTSKSETINS 507
HC+ ++N T+GA G G + L +T RL D+ +HC L + + TI +
Sbjct: 170 HCYLVSNAYPSTIGAKGFDVGDSALLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTIGA 229
>SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 444 TKQGFLREWEDISNCGKPIIAAVNGFAL 527
T++ LR ++DIS C + I VNGF++
Sbjct: 30 TRERLLRSYQDISECNRRIHGPVNGFSI 57
>SB_28781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 234 GSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIII 371
GS + + L NRP+A NA+ K +A+ DS + A+I+
Sbjct: 55 GSHEGIALFTFNRPEAKNAMSKNFLKLFLEALASVKHDSKVRAVIV 100
>SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1371
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 581 LFAGIDDIAQHCQLTTTSKSETINSGNDGLPTVGDVLPFTKET 453
+F+G+ QH +T TI G G T + LP T ET
Sbjct: 781 VFSGLSIQKQHAVITIKDSEITIKPGTSGAKTKVNGLPLTGET 823
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 580 FSPA*MISHSIASSQPPPRAKPLTAAMMGFPQLEMSSHSRRKPCFVLL 437
F+ A + SH + SQP P + P A++ ++H KPCF L
Sbjct: 458 FNQALLHSHP-SPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFL 504
>SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2)
Length = 276
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 720 RLHEHQRSFLSTRS---PLLSTCQRIWEDAGCLR-LRGWCQ 610
R+H R F++ S PLLSTCQR+ C R L CQ
Sbjct: 182 RVHSSMRPFVNASSRQLPLLSTCQRVLSST-CKRVLSSTCQ 221
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 498 WASHSWRCPPIHEGNPVLCCCCMYCF 421
W + C + G CCCC +CF
Sbjct: 496 WCKALFFCCGVITGCYFCCCCCFFCF 521
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 101 CRYCNSCFAGKECTEQVQSGIRN-KPSIHKV 190
C YC++C GK+ + QS I N KP I V
Sbjct: 321 CDYCDACLKGKDKRLEFQSLIDNYKPDIVNV 351
>SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -3
Query: 509 SGNDGLPTVGDVLPFTKET-LFCVAAVCIVLHLLNISTSRKRLLVTSDDDGSNVAVGVKI 333
S N G + + FT + +F + ++L+N + R+R + +D ++ GV +
Sbjct: 193 SDNYGRSLLDSMPHFTNLSGIFDSVNTLVSVYLINDAIDRRRNIKNYPEDPGDLG-GVGV 251
Query: 332 IDCLPEFDKQWF 297
C P + ++WF
Sbjct: 252 PYCNPHYSRKWF 263
>SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 570 HR*YRTALPAHNHLQERNH*QRQ*WASHSWRCPPIHEGNPV 448
H +R L L+ R+ + WA H+ R PP+ GN V
Sbjct: 1027 HPTWRDTLALREALRNRHMQASERWAEHTKRLPPLVVGNHV 1067
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,070,620
Number of Sequences: 59808
Number of extensions: 540985
Number of successful extensions: 1687
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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