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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b12
         (721 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr...   114   5e-26
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat...   104   5e-23
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr...   104   7e-23
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP...    98   6e-21
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t...    97   8e-21
At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro...    92   4e-19
At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas...    75   5e-14
At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas...    68   7e-12
At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family pr...    68   7e-12
At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr...    65   5e-11
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas...    65   5e-11
At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family pr...    64   1e-10
At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family pr...    56   2e-08
At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr...    54   7e-08
At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family pr...    38   0.005
At3g08760.1 68416.m01018 protein kinase family protein contains ...    31   0.58 
At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family pr...    31   0.77 
At1g71740.1 68414.m08292 hypothetical protein                          29   3.1  
At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family pr...    29   4.1  
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea...    28   5.4  
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa...    28   7.2  
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa...    27   9.5  
At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containi...    27   9.5  
At4g15820.1 68417.m02407 wound-responsive protein-related contai...    27   9.5  
At3g51620.2 68416.m05659 expressed protein                             27   9.5  
At3g51620.1 68416.m05658 expressed protein                             27   9.5  
At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family...    27   9.5  
At2g34750.1 68415.m04267 RNA polymerase I specific transcription...    27   9.5  
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ...    27   9.5  

>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
           protein similar to 3-hydroxybutyryl-CoA dehydratase
           (Crotonase) from Clostridium acetobutylicum [SP|P52046],
           FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
           [GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
           hydratase/isomerase family protein
          Length = 265

 Score =  114 bits (275), Expect = 5e-26
 Identities = 57/161 (35%), Positives = 91/161 (56%)
 Frame = +3

Query: 210 ENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKA 389
           EN+ ++V      + +I +NRPK+LN+L + + V+L KA  D D+D ++  +I TG+ ++
Sbjct: 7   ENL-IQVKKESGGIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRS 65

Query: 390 FAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIY 569
           F +G D+   ++  +  + K         +    KPII A+NGFA+  G ELA+ CDI+ 
Sbjct: 66  FCSGVDLTAAES-VFKGDVKDPETDPVVQMERLRKPIIGAINGFAITAGFELALACDILV 124

Query: 570 AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLT 692
           A   AKF       G  P  G +Q+L R +G +KA E+ LT
Sbjct: 125 ASRGAKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLT 165


>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
           acid multifunctional protein (AIM1) identical to
           gi:4337025; contains Pfam profiles PF02737
           (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
           PF00378 (enoyl-CoA hydratase/isomerase family protein),
           PF00725 (3-hydroxyacyl-CoA dehydrogenase)
          Length = 721

 Score =  104 bits (250), Expect = 5e-23
 Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
 Frame = +3

Query: 210 ENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKA 389
           + I V +      V +I ++ P  +N+L  P+   L +   D +  +++ AI++ GN   
Sbjct: 3   KKIGVTMEVGNDGVAVITISNPP-VNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGR 61

Query: 390 FAAGADIKEMQNNTYSSNTKQGFLREWEDIS---------NCGKPIIAAVNGFALGGGCE 542
           F+ G DI     N +    K G L    ++S         +  KP++AAV G ALGGG E
Sbjct: 62  FSGGFDI-----NVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLE 116

Query: 543 LAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHE 716
           LAM C    A  KA+ G PE+ +G IPG GGTQRLPR VG +KA +++L      + E
Sbjct: 117 LAMACHARVAAPKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEE 174


>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
           protein similar to Delta 3,5-delta2,4-dienoyl-CoA
           isomerase, mitochondrial (ECH1) from Rattus norvegicus
           [SP|Q62651], from Homo sapiens [SP|Q13011]; contains
           Pfam profile PF00378 enoyl-CoA hydratase/isomerase
           family protein
          Length = 278

 Score =  104 bits (249), Expect = 7e-23
 Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
 Frame = +3

Query: 204 SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNE 383
           SY+ +++    +  +V  + +NRP  LNAL    F+E  KA++  D + +++ II++G  
Sbjct: 5   SYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAG 64

Query: 384 KAFAAGADIKEMQNNTYSSNTKQGFLREWED--------------ISNCGKPIIAAVNGF 521
           K F +G D+  + + +  S++     R  E               I  C KP+IAA++G 
Sbjct: 65  KHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGA 124

Query: 522 ALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNF 701
            +GGG +L   CDI Y  E A F   E+++  +   G  QRLP  VG + AME+ LT   
Sbjct: 125 CIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARR 184

Query: 702 FDAHEA 719
           F   EA
Sbjct: 185 FSGSEA 190


>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
           identical to fatty acid multifunctional protein (AtMFP2)
           GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
           acid beta-oxidation); contains Pfam profiles PF02737
           (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
           PF00378 (enoyl-CoA hydratase/isomerase family protein),
           PF00725 (3-hydroxyacyl-CoA dehydrogenase)
          Length = 725

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
 Frame = +3

Query: 249 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIK---EM 419
           V +I L  P  +N+L   +   L     +  + +++ AI+ITG +  F+ G DI    EM
Sbjct: 18  VAVITLINPP-VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEM 76

Query: 420 QNNTYSSNTKQGFLRE---WEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 590
           Q        K G++      + +    KP +AA++G ALGGG ELAM C    +   A+ 
Sbjct: 77  QKGNVKE-PKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQL 135

Query: 591 GQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHE 716
           G PE+ +G IPG GGTQRLPR VG +KA+E++LT     A E
Sbjct: 136 GLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEE 177


>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
           AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
           GI:780241, [Mus musculus]GI:6840920; contains Pfam
           profile PF00378 enoyl-CoA hydratase/isomerase family
           protein
          Length = 229

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 54/112 (48%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
 Frame = +3

Query: 390 FAAGADIKEMQNNTYSS-NTKQGFLRE-WEDISNCGKPIIAAVNGFALGGGCELAMLCDI 563
           F AGAD+KE +  + S  +T    LR  +  I     P IAA+ G ALGGG E+A+ CD+
Sbjct: 31  FCAGADLKERRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALGGGLEMALACDL 90

Query: 564 IYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
              GE A FG PE  +  IPGAGGTQRL R VG+S + E++ TG   DA EA
Sbjct: 91  RICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEA 142


>At1g60550.1 68414.m06816 naphthoate synthase, putative /
           dihydroxynaphthoic acid synthetase, putative / DHNA
           synthetase, putative contains similarity to MENB from
           Escherichia coli [SP|P27290], Bacillus subtilis
           [SP|P23966]; contains Pfam profile PF00378 enoyl-CoA
           hydratase/isomerase family protein
          Length = 337

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
 Frame = +3

Query: 243 KNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGADIKEM 419
           + +  I +NRP+  NA       EL +A ND   DS++  II+TG   KAF +G D    
Sbjct: 85  EGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAFCSGGDQALR 144

Query: 420 QNNTYSSNTKQGFLREWE---DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 590
             + Y+     G L   +    I    KP+IA V G+A+GGG  L M+CD+  A + A F
Sbjct: 145 TQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIF 204

Query: 591 GQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719
           GQ    +G+     G+  + R VG  KA E+     F+ A EA
Sbjct: 205 GQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEA 247


>At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase,
           putative / CoA-thioester hydrolase, putative strong
           similarity to gi:8572760; contains Pfam profile PF00388
           enoyl-CoA hydratase/isomerase family protein
          Length = 378

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
 Frame = +3

Query: 228 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 407
           +V  K +V ++ LNRPK LNALC  +   L +    ++ D ++  +I+ G  +AF AG D
Sbjct: 8   LVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCAGGD 67

Query: 408 IKEMQNNTYSSNTKQG--FLREWEDI----SNCGKPIIAAVNGFALGGGCELAMLCDIIY 569
           +  +  N      + G  F R+   +    +   KP ++ +NG  +G G  +++      
Sbjct: 68  VPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRI 127

Query: 570 AGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGK 665
           A E   F  PE ++G  P  G +    RLP + G+
Sbjct: 128 ATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGE 162


>At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase /
           CoA-thioester hydrolase (CHY1) identical to gi:8572760;
           contains Pfam profile PF00388 enoyl-CoA
           hydratase/isomerase family protein
          Length = 378

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
 Frame = +3

Query: 228 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 407
           +V  K +V ++ LNRPK LNAL   +   L +    F+ D ++  +I+ G+ +AF AG D
Sbjct: 12  LVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGD 71

Query: 408 IKEMQNNTYSSNTKQG---FLREW---EDISNCGKPIIAAVNGFALGGGCELAMLCDIIY 569
           +  +  +    N + G   F  E+     ++   K  ++ +NG  +GGG  +++      
Sbjct: 72  VAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRI 131

Query: 570 AGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGK 665
           A E   F  PE  +G  P  G +    RLP + G+
Sbjct: 132 ATENTVFAMPETALGLFPDVGASYFLSRLPGFFGE 166


>At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family
           protein similar to CHY1 [gi:8572760]; contains Pfam
           profile PF00388 enoyl-CoA hydratase/isomerase family
           protein
          Length = 409

 Score = 67.7 bits (158), Expect = 7e-12
 Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
 Frame = +3

Query: 195 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 374
           S A +E+ +V V G  K+   I LN P +LNAL  P+   L +    ++ +  I+ +++ 
Sbjct: 35  SDADFED-QVLVEGKAKSRAAI-LNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMK 92

Query: 375 GNEKAFAAGADIKEMQNNTYSSNTKQG---FLREWEDISNCG---KPIIAAVNGFALGGG 536
           G+ K F +GAD+  + ++    NT++    F   ++ +   G   KP IA ++G  +G G
Sbjct: 93  GSGKTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCG 152

Query: 537 CELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGKSKAM 677
             +++      A +K     PE+ IG  P AG +    RLP Y+G+  A+
Sbjct: 153 GGISLPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLPGYLGEYLAL 202


>At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family
           protein similar to enoyl-CoA-hydratase, Avicennia
           marina, EMBL:AF190450 [GI:6014701], CoA-thioester
           hydrolase CHY1 from Arabidopsis thaliana [GI:8572760];
           contains Pfam profile PF00378 enoyl-CoA
           hydratase/isomerase family protein
          Length = 401

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
 Frame = +3

Query: 117 RALLGKNVLNKC-KVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNAL 293
           + LLG+ V +K  +     S  S+K  S      + VE  G  +      LNRP ALNAL
Sbjct: 5   KGLLGRIVRDKLWRFGYRRSLCSLKLTSEDLDYQVLVEGSGCSRTA---ILNRPPALNAL 61

Query: 294 CKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQN-NTYSS--NTKQGFLR 464
              +   L K   +++ D NI  +++ G+ +AF AG DI  + +  T  S    ++ F  
Sbjct: 62  TTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRTRGSPDAIREFFSS 121

Query: 465 EWEDISNCG---KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGG 635
            +  I   G   KP +A +NG  +GGG  +++      A ++  F  PE  IG  P AG 
Sbjct: 122 LYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGA 181

Query: 636 TQRLPRYVGK 665
           +  L    G+
Sbjct: 182 SFNLSHLPGR 191


>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
           putative / CoA-thioester hydrolase, putative strong
           similarity to gi:8572760; contains Pfam profile PF00388
           enoyl-CoA hydratase/isomerase family protein
          Length = 422

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
 Frame = +3

Query: 228 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 407
           +V  K +V ++  NRPK LNAL   +   L +    ++ D ++  +++ G  +AF+AG D
Sbjct: 52  LVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGD 111

Query: 408 IKEMQNNTYSSNT-------KQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDII 566
           I  +  +             K G+   +  +S   KP ++ +NG  +GGG  L+      
Sbjct: 112 IPPIVRDILQGKLIRGAHYFKVGYTLNYV-LSTYRKPQVSILNGIVMGGGAGLSTNGRFR 170

Query: 567 YAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGK 665
            A E   F  PE  +G  P  G +    RLP + G+
Sbjct: 171 IATENTVFAMPETALGLFPDVGASYFLSRLPGFFGE 206


>At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family
           protein similar to CHY1 [gi:8572760]; contains Pfam
           profile PF00388 enoyl-CoA hydratase/isomerase family
           protein
          Length = 387

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
 Frame = +3

Query: 228 VVGSKK-NVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGA 404
           V+G +K +V L  LNRP+ LN +   +  +L + +  ++ D     I+I G  +AF+AG 
Sbjct: 13  VIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGG 72

Query: 405 DIKEMQNNTYSSNT--KQGFLREW--EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYA 572
           D+K   +   S ++  +  +   W    I    K  ++ VNG ++GGG  L +       
Sbjct: 73  DLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVV 132

Query: 573 GEKAKFGQPEINIGTIPGAGGT---QRLPRYVGKSKAM 677
            EK  F  PE + G     G +    RLP ++G+  A+
Sbjct: 133 TEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLAL 170


>At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family
           protein similar to CHY1 [gi:8572760]; contains Pfam
           profile PF00388 enoyl-CoA hydratase/isomerase family
           protein
          Length = 418

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
 Frame = +3

Query: 159 VSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDF 338
           +S + +      ++ S E +K  V  +   V LI L+RPKALNA+   + ++    ++++
Sbjct: 28  LSVSHRRKFSVMASGSDEFVKGNVYPN--GVALITLDRPKALNAMNLEMDLKYKSLLDEW 85

Query: 339 DADSNIAAIIITGN-EKAFAAGADIK----EMQNNTYSSNTKQGFLREWE---DISNCGK 494
           + D  +  +++ G+  +AF AG DIK    E+  +  +S  ++ F  E+     I+   K
Sbjct: 86  EYDPGVKCVVVEGSTSRAFCAGMDIKGVVAEILMDKNTSLVQKVFTAEYSLICKIAGYRK 145

Query: 495 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAG 632
           P I+ ++G  +G G  L+         E+     PE  IG  P  G
Sbjct: 146 PYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVG 191


>At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family
           protein similar to CoA-thioester hydrolase CHY1
           (beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis
           thaliana] GI:8572760; contains Pfam profile PF00378:
           enoyl-CoA hydratase/isomerase family protein
          Length = 381

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
 Frame = +3

Query: 249 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGADIK---- 413
           V LI L+R KALNA+   + ++    ++++++D  +  +I+ G+  +AF AG DIK    
Sbjct: 19  VALITLDRTKALNAMNLDMDIKYKSFLDEWESDPRVKCVIVEGSTSRAFCAGMDIKGVAA 78

Query: 414 EMQNNTYSSNTKQGFLREWE---DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKA 584
           E+Q +  +   ++ F  E+     I+   KP I+ ++G  +G G  L+         E+ 
Sbjct: 79  EIQKDKNTPLVQKVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERT 138

Query: 585 KFGQPEINIGTIPGAG 632
               PE  IG  P  G
Sbjct: 139 VLAMPENGIGLFPDVG 154


>At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family
           protein low similarity to enoyl-CoA hydratase
           [Escherichia coli] GI:2764828, carnitine racemase
           SP|P31551 [Escherichia coli]; contains Pfam profile
           PF00378 enoyl-CoA hydratase/isomerase family protein
          Length = 240

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = +3

Query: 303 LFVELGKAVNDFDADSNIA--AIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREW-E 473
           L   L   +N   +D + +   +I T + K F+ G D+   ++N   S      LR    
Sbjct: 27  LLDSLRSTINQIRSDPSFSQSVLITTSDGKFFSNGYDLALAESNPSLSVVMDAKLRSLVA 86

Query: 474 DISNCGKPIIAAVNGFALGGGCELAMLCDII 566
           D+ +   P IAAV G A   GC LAM  D +
Sbjct: 87  DLISLPMPTIAAVTGHASAAGCILAMSHDYV 117


>At3g08760.1 68416.m01018 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 557

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 589 SVSPRSTLAPSPEPEAPSVFP 651
           SV PRS+ +PSP P  PSV P
Sbjct: 493 SVPPRSSFSPSPPPRRPSVSP 513


>At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family
           protein low siimilarity to 2-cyclohexenylcarbonyl CoA
           isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA
           isomerase [Escherichia coli] GI:2764829; contains Pfam
           profile PF00378 enoyl-CoA hydratase/isomerase family
           protein
          Length = 240

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
 Frame = +3

Query: 363 IIITGNEKAFAAGADIKEMQ---NNTYSSNTKQGFLREWEDIS----NCGKPIIAAVNGF 521
           +I T N K F+ G D+   Q   + T ++N     +  ++ +     +   P IAA+NG 
Sbjct: 48  LITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGH 107

Query: 522 ALGGGCELAMLCDIIY-AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKA-MEIVLTG 695
           A   G  LA+  D ++   ++      E++IG       +  +   +G S A  E++L+G
Sbjct: 108 AAAAGLILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRELLLSG 167

Query: 696 NFFDAHEA 719
                 EA
Sbjct: 168 KKIRGEEA 175


>At1g71740.1 68414.m08292 hypothetical protein
          Length = 130

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -1

Query: 550 IASSQPPPRAKPLTAAMMGFPQ-----LEMSSHSRRK 455
           +A + PP R KPLT   MG        + ++SHS+RK
Sbjct: 1   MAQTVPPSRTKPLTIFKMGLASASVRLVNLASHSKRK 37


>At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family
           protein low similarity to PhaB [Pseudomonas putida]
           GI:3253198, SP|P31551 Carnitine racemase {Escherichia
           coli}; contains Pfam profile PF00378 enoyl-CoA
           hydratase/isomerase family protein
          Length = 238

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
 Frame = +3

Query: 357 AAIIITGNEKAFAAGADIKEMQNNTYSSNTK-----QGFLREWEDISNCGKPIIAAVNGF 521
           + +I TG+ K F+ G D+   Q+  + +  +     + F      + +   P IAA+NG 
Sbjct: 46  SVLITTGHGKFFSNGFDLAWAQSAGHGAIKRMHQMVKSFKPVLAALLDLPMPTIAALNGH 105

Query: 522 ALGGGCELAMLCDIIY-AGEKAKFGQPEINIG-TIPGAGGTQRLPRYVGKSKAMEIVLTG 695
           A   G   A+  D ++   ++      E++IG  +P       + +        E++L+G
Sbjct: 106 AAASGLMFALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRELLLSG 165

Query: 696 NFFDAHEA 719
                 EA
Sbjct: 166 KKLKGEEA 173


>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
           family protein contains similarity to regulatory protein
           Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
           (6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
          Length = 781

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -3

Query: 425 VLHLLNISTSRKRLLVTSDDDGS 357
           VL LL+ S S + LLVT+ DDG+
Sbjct: 180 VLRLLDYSRSSRHLLVTAGDDGT 202


>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
           family protein low similarity to SP|P79263
           Inter-alpha-trypsin inhibitor heavy chain H4 precursor
           {Sus scrofa}; contains Pfam profiles PF00097: Zinc
           finger, C3HC4 type (RING finger), PF00092: von
           Willebrand factor type A domain
          Length = 641

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 649 GRRWVPPAPGMVPMLISG*PNFAFSPA 569
           GRRW  P  GM+ +L  G  NF FS A
Sbjct: 294 GRRWKNPVSGMM-LLSDGQDNFTFSHA 319


>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
           family protein contains a Prosite:PS00518 Zinc finger,
           C3HC4 type (RING finger), signature and Pfam domain
           PF01485: IBR domain
          Length = 655

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 622 PEPEAPSVFPDTLASRKQWRSC 687
           PEP A  V   +LA+ K WR C
Sbjct: 449 PEPPADDVKLKSLANNKMWRQC 470


>At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 938

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 417 MQNNTYSSNTKQGFLREWEDISNCG-KPIIAAVNGFALGGGCELAMLCDIIY 569
           M N+       +G L+ W+ + +CG KP + + N   +G  CE   + + I+
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN-IVVGMLCENGKMEEAIH 629


>At4g15820.1 68417.m02407 wound-responsive protein-related contains
           weak similarity to KED [Nicotiana tabacum]
           gi|8096269|dbj|BAA95789
          Length = 460

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 452 LFCVAAVCIVLHLLNISTSRKRLLVTSDDDGSNVAV 345
           +F    VC VL L + + S K   V+SD +G+N+ +
Sbjct: 92  IFAFQTVCAVLFLGDSTKSEKTPEVSSDSEGNNLVL 127


>At3g51620.2 68416.m05659 expressed protein
          Length = 542

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 582 PFRRHR*YRTALPAHNHLQE 523
           PF R+  Y   LPA NH QE
Sbjct: 95  PFLRYNRYNAILPASNHFQE 114


>At3g51620.1 68416.m05658 expressed protein
          Length = 755

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 582 PFRRHR*YRTALPAHNHLQE 523
           PF R+  Y   LPA NH QE
Sbjct: 321 PFLRYNRYNAILPASNHFQE 340


>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965; related to vegetative cell wall
           protein gp1 [Chlamydomonas reinhardtii]
           gi|12018147|gb|AAG45420
          Length = 175

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 562 SSMPAKRRNSVSPRSTLAPSPEPEAPSV 645
           S  P    +S SP S+ +PSP PEA  V
Sbjct: 81  SVSPPLPNDSQSPSSSASPSPSPEASDV 108


>At2g34750.1 68415.m04267 RNA polymerase I specific transcription
           initiation factor RRN3 family protein contains Pfam
           PF05327: RNA polymerase I specific transcription
           initiation factor RRN3;  similar to RRN3 (GI:7670100)
           [Homo sapiens] similar to RNA polymerase I specific
           transcription initiation factor RRN3 (Swiss-Prot:P36070)
           [Saccharomyces cerevisiae]
          Length = 613

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 276 KALNALCKPLFV--ELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTK 449
           K+ N+   P F+   + KA  D D D N A +I+ G+E +        +   N  S   K
Sbjct: 526 KSSNSFISPNFIYWSMVKATYDEDDDDNDAEVIVNGDEDSDEDDEADLDYALNKMSITPK 585

Query: 450 QGFLREWE 473
             F  + E
Sbjct: 586 HSFKNKME 593


>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
           protein similar to UBP1 interacting protein 1a
           [Arabidopsis thaliana] GI:19574236; contains Pfam
           profile: PF00076 RNA recognition motif (aka RRM, RBD, or
           RNP domain)
          Length = 382

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 541 SQPPPRAKPLTAAMMGFPQL 482
           SQPPP   P+  AMMG P +
Sbjct: 304 SQPPPGFNPMYGAMMGNPMV 323


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,208
Number of Sequences: 28952
Number of extensions: 375685
Number of successful extensions: 1234
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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