BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10b12 (721 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 114 5e-26 At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 104 5e-23 At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 104 7e-23 At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 98 6e-21 At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 97 8e-21 At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro... 92 4e-19 At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas... 75 5e-14 At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas... 68 7e-12 At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family pr... 68 7e-12 At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr... 65 5e-11 At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 65 5e-11 At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family pr... 64 1e-10 At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family pr... 56 2e-08 At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr... 54 7e-08 At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family pr... 38 0.005 At3g08760.1 68416.m01018 protein kinase family protein contains ... 31 0.58 At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family pr... 31 0.77 At1g71740.1 68414.m08292 hypothetical protein 29 3.1 At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family pr... 29 4.1 At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 5.4 At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 28 7.2 At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 27 9.5 At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containi... 27 9.5 At4g15820.1 68417.m02407 wound-responsive protein-related contai... 27 9.5 At3g51620.2 68416.m05659 expressed protein 27 9.5 At3g51620.1 68416.m05658 expressed protein 27 9.5 At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family... 27 9.5 At2g34750.1 68415.m04267 RNA polymerase I specific transcription... 27 9.5 At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 27 9.5 >At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family protein similar to 3-hydroxybutyryl-CoA dehydratase (Crotonase) from Clostridium acetobutylicum [SP|P52046], FadB1x (enoyl-CoA hydratase) from Pseudomonas putida [GI:13310130]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 265 Score = 114 bits (275), Expect = 5e-26 Identities = 57/161 (35%), Positives = 91/161 (56%) Frame = +3 Query: 210 ENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKA 389 EN+ ++V + +I +NRPK+LN+L + + V+L KA D D+D ++ +I TG+ ++ Sbjct: 7 ENL-IQVKKESGGIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRS 65 Query: 390 FAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIY 569 F +G D+ ++ + + K + KPII A+NGFA+ G ELA+ CDI+ Sbjct: 66 FCSGVDLTAAES-VFKGDVKDPETDPVVQMERLRKPIIGAINGFAITAGFELALACDILV 124 Query: 570 AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLT 692 A AKF G P G +Q+L R +G +KA E+ LT Sbjct: 125 ASRGAKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLT 165 >At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty acid multifunctional protein (AIM1) identical to gi:4337025; contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase) Length = 721 Score = 104 bits (250), Expect = 5e-23 Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 9/178 (5%) Frame = +3 Query: 210 ENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKA 389 + I V + V +I ++ P +N+L P+ L + D + +++ AI++ GN Sbjct: 3 KKIGVTMEVGNDGVAVITISNPP-VNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGR 61 Query: 390 FAAGADIKEMQNNTYSSNTKQGFLREWEDIS---------NCGKPIIAAVNGFALGGGCE 542 F+ G DI N + K G L ++S + KP++AAV G ALGGG E Sbjct: 62 FSGGFDI-----NVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLE 116 Query: 543 LAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHE 716 LAM C A KA+ G PE+ +G IPG GGTQRLPR VG +KA +++L + E Sbjct: 117 LAMACHARVAAPKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEE 174 >At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family protein similar to Delta 3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial (ECH1) from Rattus norvegicus [SP|Q62651], from Homo sapiens [SP|Q13011]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 278 Score = 104 bits (249), Expect = 7e-23 Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 14/186 (7%) Frame = +3 Query: 204 SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNE 383 SY+ +++ + +V + +NRP LNAL F+E KA++ D + +++ II++G Sbjct: 5 SYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAG 64 Query: 384 KAFAAGADIKEMQNNTYSSNTKQGFLREWED--------------ISNCGKPIIAAVNGF 521 K F +G D+ + + + S++ R E I C KP+IAA++G Sbjct: 65 KHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGA 124 Query: 522 ALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNF 701 +GGG +L CDI Y E A F E+++ + G QRLP VG + AME+ LT Sbjct: 125 CIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARR 184 Query: 702 FDAHEA 719 F EA Sbjct: 185 FSGSEA 190 >At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2) identical to fatty acid multifunctional protein (AtMFP2) GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty acid beta-oxidation); contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase) Length = 725 Score = 97.9 bits (233), Expect = 6e-21 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 6/162 (3%) Frame = +3 Query: 249 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIK---EM 419 V +I L P +N+L + L + + +++ AI+ITG + F+ G DI EM Sbjct: 18 VAVITLINPP-VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEM 76 Query: 420 QNNTYSSNTKQGFLRE---WEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 590 Q K G++ + + KP +AA++G ALGGG ELAM C + A+ Sbjct: 77 QKGNVKE-PKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQL 135 Query: 591 GQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHE 716 G PE+ +G IPG GGTQRLPR VG +KA+E++LT A E Sbjct: 136 GLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEE 177 >At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to AU-binding protein/Enoyl-CoA hydratase [Homo sapiens] GI:780241, [Mus musculus]GI:6840920; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 229 Score = 97.5 bits (232), Expect = 8e-21 Identities = 54/112 (48%), Positives = 68/112 (60%), Gaps = 2/112 (1%) Frame = +3 Query: 390 FAAGADIKEMQNNTYSS-NTKQGFLRE-WEDISNCGKPIIAAVNGFALGGGCELAMLCDI 563 F AGAD+KE + + S +T LR + I P IAA+ G ALGGG E+A+ CD+ Sbjct: 31 FCAGADLKERRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALGGGLEMALACDL 90 Query: 564 IYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719 GE A FG PE + IPGAGGTQRL R VG+S + E++ TG DA EA Sbjct: 91 RICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEA 142 >At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydroxynaphthoic acid synthetase, putative / DHNA synthetase, putative contains similarity to MENB from Escherichia coli [SP|P27290], Bacillus subtilis [SP|P23966]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 337 Score = 91.9 bits (218), Expect = 4e-19 Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 4/163 (2%) Frame = +3 Query: 243 KNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGADIKEM 419 + + I +NRP+ NA EL +A ND DS++ II+TG KAF +G D Sbjct: 85 EGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAFCSGGDQALR 144 Query: 420 QNNTYSSNTKQGFLREWE---DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 590 + Y+ G L + I KP+IA V G+A+GGG L M+CD+ A + A F Sbjct: 145 TQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAIF 204 Query: 591 GQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 719 GQ +G+ G+ + R VG KA E+ F+ A EA Sbjct: 205 GQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEA 247 >At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative strong similarity to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 378 Score = 74.9 bits (176), Expect = 5e-14 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 9/155 (5%) Frame = +3 Query: 228 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 407 +V K +V ++ LNRPK LNALC + L + ++ D ++ +I+ G +AF AG D Sbjct: 8 LVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCAGGD 67 Query: 408 IKEMQNNTYSSNTKQG--FLREWEDI----SNCGKPIIAAVNGFALGGGCELAMLCDIIY 569 + + N + G F R+ + + KP ++ +NG +G G +++ Sbjct: 68 VPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRI 127 Query: 570 AGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGK 665 A E F PE ++G P G + RLP + G+ Sbjct: 128 ATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGE 162 >At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase / CoA-thioester hydrolase (CHY1) identical to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 378 Score = 67.7 bits (158), Expect = 7e-12 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 9/155 (5%) Frame = +3 Query: 228 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 407 +V K +V ++ LNRPK LNAL + L + F+ D ++ +I+ G+ +AF AG D Sbjct: 12 LVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGD 71 Query: 408 IKEMQNNTYSSNTKQG---FLREW---EDISNCGKPIIAAVNGFALGGGCELAMLCDIIY 569 + + + N + G F E+ ++ K ++ +NG +GGG +++ Sbjct: 72 VAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRI 131 Query: 570 AGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGK 665 A E F PE +G P G + RLP + G+ Sbjct: 132 ATENTVFAMPETALGLFPDVGASYFLSRLPGFFGE 166 >At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 409 Score = 67.7 bits (158), Expect = 7e-12 Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 9/170 (5%) Frame = +3 Query: 195 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 374 S A +E+ +V V G K+ I LN P +LNAL P+ L + ++ + I+ +++ Sbjct: 35 SDADFED-QVLVEGKAKSRAAI-LNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMK 92 Query: 375 GNEKAFAAGADIKEMQNNTYSSNTKQG---FLREWEDISNCG---KPIIAAVNGFALGGG 536 G+ K F +GAD+ + ++ NT++ F ++ + G KP IA ++G +G G Sbjct: 93 GSGKTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCG 152 Query: 537 CELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGKSKAM 677 +++ A +K PE+ IG P AG + RLP Y+G+ A+ Sbjct: 153 GGISLPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLPGYLGEYLAL 202 >At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family protein similar to enoyl-CoA-hydratase, Avicennia marina, EMBL:AF190450 [GI:6014701], CoA-thioester hydrolase CHY1 from Arabidopsis thaliana [GI:8572760]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 401 Score = 64.9 bits (151), Expect = 5e-11 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 7/190 (3%) Frame = +3 Query: 117 RALLGKNVLNKC-KVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNAL 293 + LLG+ V +K + S S+K S + VE G + LNRP ALNAL Sbjct: 5 KGLLGRIVRDKLWRFGYRRSLCSLKLTSEDLDYQVLVEGSGCSRTA---ILNRPPALNAL 61 Query: 294 CKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQN-NTYSS--NTKQGFLR 464 + L K +++ D NI +++ G+ +AF AG DI + + T S ++ F Sbjct: 62 TTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRTRGSPDAIREFFSS 121 Query: 465 EWEDISNCG---KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGG 635 + I G KP +A +NG +GGG +++ A ++ F PE IG P AG Sbjct: 122 LYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGA 181 Query: 636 TQRLPRYVGK 665 + L G+ Sbjct: 182 SFNLSHLPGR 191 >At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative strong similarity to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 422 Score = 64.9 bits (151), Expect = 5e-11 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%) Frame = +3 Query: 228 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 407 +V K +V ++ NRPK LNAL + L + ++ D ++ +++ G +AF+AG D Sbjct: 52 LVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGD 111 Query: 408 IKEMQNNTYSSNT-------KQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDII 566 I + + K G+ + +S KP ++ +NG +GGG L+ Sbjct: 112 IPPIVRDILQGKLIRGAHYFKVGYTLNYV-LSTYRKPQVSILNGIVMGGGAGLSTNGRFR 170 Query: 567 YAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVGK 665 A E F PE +G P G + RLP + G+ Sbjct: 171 IATENTVFAMPETALGLFPDVGASYFLSRLPGFFGE 206 >At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 387 Score = 63.7 bits (148), Expect = 1e-10 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 8/158 (5%) Frame = +3 Query: 228 VVGSKK-NVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGA 404 V+G +K +V L LNRP+ LN + + +L + + ++ D I+I G +AF+AG Sbjct: 13 VIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGG 72 Query: 405 DIKEMQNNTYSSNT--KQGFLREW--EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYA 572 D+K + S ++ + + W I K ++ VNG ++GGG L + Sbjct: 73 DLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVV 132 Query: 573 GEKAKFGQPEINIGTIPGAGGT---QRLPRYVGKSKAM 677 EK F PE + G G + RLP ++G+ A+ Sbjct: 133 TEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLAL 170 >At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 418 Score = 56.4 bits (130), Expect = 2e-08 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 8/166 (4%) Frame = +3 Query: 159 VSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDF 338 +S + + ++ S E +K V + V LI L+RPKALNA+ + ++ ++++ Sbjct: 28 LSVSHRRKFSVMASGSDEFVKGNVYPN--GVALITLDRPKALNAMNLEMDLKYKSLLDEW 85 Query: 339 DADSNIAAIIITGN-EKAFAAGADIK----EMQNNTYSSNTKQGFLREWE---DISNCGK 494 + D + +++ G+ +AF AG DIK E+ + +S ++ F E+ I+ K Sbjct: 86 EYDPGVKCVVVEGSTSRAFCAGMDIKGVVAEILMDKNTSLVQKVFTAEYSLICKIAGYRK 145 Query: 495 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAG 632 P I+ ++G +G G L+ E+ PE IG P G Sbjct: 146 PYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVG 191 >At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family protein similar to CoA-thioester hydrolase CHY1 (beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis thaliana] GI:8572760; contains Pfam profile PF00378: enoyl-CoA hydratase/isomerase family protein Length = 381 Score = 54.4 bits (125), Expect = 7e-08 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 8/136 (5%) Frame = +3 Query: 249 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGADIK---- 413 V LI L+R KALNA+ + ++ ++++++D + +I+ G+ +AF AG DIK Sbjct: 19 VALITLDRTKALNAMNLDMDIKYKSFLDEWESDPRVKCVIVEGSTSRAFCAGMDIKGVAA 78 Query: 414 EMQNNTYSSNTKQGFLREWE---DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKA 584 E+Q + + ++ F E+ I+ KP I+ ++G +G G L+ E+ Sbjct: 79 EIQKDKNTPLVQKVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERT 138 Query: 585 KFGQPEINIGTIPGAG 632 PE IG P G Sbjct: 139 VLAMPENGIGLFPDVG 154 >At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family protein low similarity to enoyl-CoA hydratase [Escherichia coli] GI:2764828, carnitine racemase SP|P31551 [Escherichia coli]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 240 Score = 38.3 bits (85), Expect = 0.005 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Frame = +3 Query: 303 LFVELGKAVNDFDADSNIA--AIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREW-E 473 L L +N +D + + +I T + K F+ G D+ ++N S LR Sbjct: 27 LLDSLRSTINQIRSDPSFSQSVLITTSDGKFFSNGYDLALAESNPSLSVVMDAKLRSLVA 86 Query: 474 DISNCGKPIIAAVNGFALGGGCELAMLCDII 566 D+ + P IAAV G A GC LAM D + Sbjct: 87 DLISLPMPTIAAVTGHASAAGCILAMSHDYV 117 >At3g08760.1 68416.m01018 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 557 Score = 31.5 bits (68), Expect = 0.58 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 589 SVSPRSTLAPSPEPEAPSVFP 651 SV PRS+ +PSP P PSV P Sbjct: 493 SVPPRSSFSPSPPPRRPSVSP 513 >At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family protein low siimilarity to 2-cyclohexenylcarbonyl CoA isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA isomerase [Escherichia coli] GI:2764829; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 240 Score = 31.1 bits (67), Expect = 0.77 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 9/128 (7%) Frame = +3 Query: 363 IIITGNEKAFAAGADIKEMQ---NNTYSSNTKQGFLREWEDIS----NCGKPIIAAVNGF 521 +I T N K F+ G D+ Q + T ++N + ++ + + P IAA+NG Sbjct: 48 LITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGH 107 Query: 522 ALGGGCELAMLCDIIY-AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKA-MEIVLTG 695 A G LA+ D ++ ++ E++IG + + +G S A E++L+G Sbjct: 108 AAAAGLILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRELLLSG 167 Query: 696 NFFDAHEA 719 EA Sbjct: 168 KKIRGEEA 175 >At1g71740.1 68414.m08292 hypothetical protein Length = 130 Score = 29.1 bits (62), Expect = 3.1 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%) Frame = -1 Query: 550 IASSQPPPRAKPLTAAMMGFPQ-----LEMSSHSRRK 455 +A + PP R KPLT MG + ++SHS+RK Sbjct: 1 MAQTVPPSRTKPLTIFKMGLASASVRLVNLASHSKRK 37 >At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family protein low similarity to PhaB [Pseudomonas putida] GI:3253198, SP|P31551 Carnitine racemase {Escherichia coli}; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 238 Score = 28.7 bits (61), Expect = 4.1 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 7/128 (5%) Frame = +3 Query: 357 AAIIITGNEKAFAAGADIKEMQNNTYSSNTK-----QGFLREWEDISNCGKPIIAAVNGF 521 + +I TG+ K F+ G D+ Q+ + + + + F + + P IAA+NG Sbjct: 46 SVLITTGHGKFFSNGFDLAWAQSAGHGAIKRMHQMVKSFKPVLAALLDLPMPTIAALNGH 105 Query: 522 ALGGGCELAMLCDIIY-AGEKAKFGQPEINIG-TIPGAGGTQRLPRYVGKSKAMEIVLTG 695 A G A+ D ++ ++ E++IG +P + + E++L+G Sbjct: 106 AAASGLMFALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRELLLSG 165 Query: 696 NFFDAHEA 719 EA Sbjct: 166 KKLKGEEA 173 >At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat family protein contains similarity to regulatory protein Nedd1; contains Pfam PF00400: WD domain, G-beta repeat (6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466 Length = 781 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -3 Query: 425 VLHLLNISTSRKRLLVTSDDDGS 357 VL LL+ S S + LLVT+ DDG+ Sbjct: 180 VLRLLDYSRSSRHLLVTAGDDGT 202 >At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) family protein low similarity to SP|P79263 Inter-alpha-trypsin inhibitor heavy chain H4 precursor {Sus scrofa}; contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain Length = 641 Score = 27.9 bits (59), Expect = 7.2 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 649 GRRWVPPAPGMVPMLISG*PNFAFSPA 569 GRRW P GM+ +L G NF FS A Sbjct: 294 GRRWKNPVSGMM-LLSDGQDNFTFSHA 319 >At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) family protein contains a Prosite:PS00518 Zinc finger, C3HC4 type (RING finger), signature and Pfam domain PF01485: IBR domain Length = 655 Score = 27.5 bits (58), Expect = 9.5 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 Query: 622 PEPEAPSVFPDTLASRKQWRSC 687 PEP A V +LA+ K WR C Sbjct: 449 PEPPADDVKLKSLANNKMWRQC 470 >At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 938 Score = 27.5 bits (58), Expect = 9.5 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 417 MQNNTYSSNTKQGFLREWEDISNCG-KPIIAAVNGFALGGGCELAMLCDIIY 569 M N+ +G L+ W+ + +CG KP + + N +G CE + + I+ Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN-IVVGMLCENGKMEEAIH 629 >At4g15820.1 68417.m02407 wound-responsive protein-related contains weak similarity to KED [Nicotiana tabacum] gi|8096269|dbj|BAA95789 Length = 460 Score = 27.5 bits (58), Expect = 9.5 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -3 Query: 452 LFCVAAVCIVLHLLNISTSRKRLLVTSDDDGSNVAV 345 +F VC VL L + + S K V+SD +G+N+ + Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDSEGNNLVL 127 >At3g51620.2 68416.m05659 expressed protein Length = 542 Score = 27.5 bits (58), Expect = 9.5 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -2 Query: 582 PFRRHR*YRTALPAHNHLQE 523 PF R+ Y LPA NH QE Sbjct: 95 PFLRYNRYNAILPASNHFQE 114 >At3g51620.1 68416.m05658 expressed protein Length = 755 Score = 27.5 bits (58), Expect = 9.5 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -2 Query: 582 PFRRHR*YRTALPAHNHLQE 523 PF R+ Y LPA NH QE Sbjct: 321 PFLRYNRYNAILPASNHFQE 340 >At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; related to vegetative cell wall protein gp1 [Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420 Length = 175 Score = 27.5 bits (58), Expect = 9.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 562 SSMPAKRRNSVSPRSTLAPSPEPEAPSV 645 S P +S SP S+ +PSP PEA V Sbjct: 81 SVSPPLPNDSQSPSSSASPSPSPEASDV 108 >At2g34750.1 68415.m04267 RNA polymerase I specific transcription initiation factor RRN3 family protein contains Pfam PF05327: RNA polymerase I specific transcription initiation factor RRN3; similar to RRN3 (GI:7670100) [Homo sapiens] similar to RNA polymerase I specific transcription initiation factor RRN3 (Swiss-Prot:P36070) [Saccharomyces cerevisiae] Length = 613 Score = 27.5 bits (58), Expect = 9.5 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Frame = +3 Query: 276 KALNALCKPLFV--ELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTK 449 K+ N+ P F+ + KA D D D N A +I+ G+E + + N S K Sbjct: 526 KSSNSFISPNFIYWSMVKATYDEDDDDNDAEVIVNGDEDSDEDDEADLDYALNKMSITPK 585 Query: 450 QGFLREWE 473 F + E Sbjct: 586 HSFKNKME 593 >At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing protein similar to UBP1 interacting protein 1a [Arabidopsis thaliana] GI:19574236; contains Pfam profile: PF00076 RNA recognition motif (aka RRM, RBD, or RNP domain) Length = 382 Score = 27.5 bits (58), Expect = 9.5 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -1 Query: 541 SQPPPRAKPLTAAMMGFPQL 482 SQPPP P+ AMMG P + Sbjct: 304 SQPPPGFNPMYGAMMGNPMV 323 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,656,208 Number of Sequences: 28952 Number of extensions: 375685 Number of successful extensions: 1234 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 1160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1225 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1565336320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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