Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b11
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-37|CAJ44244.1|  740|Caenorhabditis elegans Hypothetical p...    29   2.6  
Z99281-34|CAJ44243.1|  917|Caenorhabditis elegans Hypothetical p...    29   2.6  
AY611485-1|AAT37524.1|  740|Caenorhabditis elegans epidermal gro...    29   2.6  
AY611484-1|AAT37523.1|  917|Caenorhabditis elegans epidermal gro...    29   2.6  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z81512-5|CAI79169.1|  417|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z69792-1|CAB61002.1|  605|Caenorhabditis elegans Hypothetical pr...    28   8.1  
D85744-1|BAA12861.1|  605|Caenorhabditis elegans HCH-1 protein.        28   8.1  

>Z99281-37|CAJ44244.1|  740|Caenorhabditis elegans Hypothetical
           protein Y57G11C.24h protein.
          Length = 740

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
           YN+    GQP P P   + +A    P  VP+ +P
Sbjct: 26  YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59


>Z99281-34|CAJ44243.1|  917|Caenorhabditis elegans Hypothetical
           protein Y57G11C.24g protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
           YN+    GQP P P   + +A    P  VP+ +P
Sbjct: 26  YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59


>AY611485-1|AAT37524.1|  740|Caenorhabditis elegans epidermal growth
           factor receptorpathway substrate 8 splice variant B
           protein.
          Length = 740

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
           YN+    GQP P P   + +A    P  VP+ +P
Sbjct: 26  YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59


>AY611484-1|AAT37523.1|  917|Caenorhabditis elegans epidermal growth
           factor receptorpathway substrate 8 splice variant A
           protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 177 YNKRPRCGQPRPQPHQRETTAYCGGPSNVPLEKP 278
           YN+    GQP P P   + +A    P  VP+ +P
Sbjct: 26  YNRSTPGGQPAPSPSHSQQSASSHHPRGVPMSQP 59


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
 Frame = +3

Query: 102 SVLPRGIENCRPIARYGYVTAE---SSIYNKRPRCGQPRPQPHQRETT----AYCGGPSN 260
           +VL   + N + +  +   T++    S+ +   R    R  PHQ ++      Y     N
Sbjct: 109 AVLKSAVRNTKEMRDFSRTTSQIERKSMRSVMERLPDNRHDPHQNQSNYNMLQYFSRKYN 168

Query: 261 VPLEKPCCYDFPCKADC 311
           +P+   C Y   CKADC
Sbjct: 169 LPMPTHC-YRHECKADC 184


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +3

Query: 195 CGQPRPQPHQRETTAYCGGPSNVPLEKPCCYDFPCKADC 311
           CG PRP P           P   P   PCC   P  A C
Sbjct: 71  CGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPC 109


>Z81512-5|CAI79169.1|  417|Caenorhabditis elegans Hypothetical
           protein F25C8.5 protein.
          Length = 417

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 644 NGLLNVILDSFKSVNKKTNMFNFCFKL 564
           N L NVI++S KSV       N CF+L
Sbjct: 288 NDLTNVIIESLKSVQNLIIQDNHCFEL 314


>Z69792-1|CAB61002.1|  605|Caenorhabditis elegans Hypothetical
           protein F40E10.1 protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/60 (26%), Positives = 21/60 (35%)
 Frame = +3

Query: 231 TTAYCGGPSNVPLEKPCCYDFPCKADCFNHGACTRPSGRYARTVWYPGECCPVVFPCQAF 410
           TT     P+       C     C A C   G  +R  G Y  TV+     C   + C+ F
Sbjct: 515 TTTTQAPPTTTTSTSQCASWSACSAQCGGCGTQSRRCGTYVETVYCNTNPCTGGYCCRPF 574


>D85744-1|BAA12861.1|  605|Caenorhabditis elegans HCH-1 protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/60 (26%), Positives = 21/60 (35%)
 Frame = +3

Query: 231 TTAYCGGPSNVPLEKPCCYDFPCKADCFNHGACTRPSGRYARTVWYPGECCPVVFPCQAF 410
           TT     P+       C     C A C   G  +R  G Y  TV+     C   + C+ F
Sbjct: 515 TTTTQAPPTTTTSTSQCASWSACSAQCGGCGTQSRRCGTYVETVYCNTNPCTGGYCCRPF 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,483,337
Number of Sequences: 27780
Number of extensions: 363685
Number of successful extensions: 986
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)