Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b09
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    26   0.25 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.99 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.0  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 344 VKNVLLAPALVISTHQLQACT 406
           +K  LLA AL+ISTHQ +A T
Sbjct: 3   LKLCLLASALLISTHQTEAKT 23


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 388 STPSMYDCRKYGHCLPSNDLITRFECLPNF 477
           S PS+  C ++GHC+    +  R +C P F
Sbjct: 33  SAPSI--CGEHGHCVNLPGVGHRCQCQPGF 60


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 602 ILGPAGNLALKREENLENHXPHHLE 676
           +LGP G+  L  +    +H  HH++
Sbjct: 148 VLGPTGSPPLTTQSMNNHHMGHHMQ 172


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 602 ILGPAGNLALKREENLENHXPHHLE 676
           +LGP G+  L  +    +H  HH++
Sbjct: 150 VLGPTGSPPLTTQSMNNHHMGHHMQ 174


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 430 LPSNDLITRFECLPN 474
           L   DL  RFECL N
Sbjct: 32  LDDRDLWLRFECLTN 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,095
Number of Sequences: 336
Number of extensions: 3188
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)