Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b06
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-5|AAK26144.1|   98|Caenorhabditis elegans Hypothetical ...    29   3.8  
AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like p...    28   6.6  
AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like ...    28   6.6  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   6.6  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   6.6  
AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like ...    28   6.6  
Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    27   8.7  
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF016442-1|AAB65918.1|  340|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AC090999-5|AAK26144.1|   98|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.10 protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -3

Query: 155 SSNGAILTGTTSASRK*LIPTNMRMQMSQKYTLKEPILCSFSMLN 21
           S    I+  T SAS K L+    R Q     +L  PI C FS LN
Sbjct: 29  SLQNRIVEQTLSASAKTLLIFKKRTQFLNSLSLPLPIWCLFSCLN 73


>AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8a protein.
          Length = 536

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 648 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 529
           DI+ +  +F I  S I   T+RF+Y F R  FI   +  N
Sbjct: 497 DIYTLFALFYIFVSTIIIVTIRFVYKFTRKHFILVKSKEN 536


>Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical
           protein F23A7.7 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 624 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 496
           FE     I    V  IYN   +S +RK +++ ++   + FRLH
Sbjct: 597 FEYFYHTIQRTLVPEIYNGIGMSIMRKMSALQEIKAEVAFRLH 639


>U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like
           protein protein 18 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 453 PSESLFVGGN-TKINSATGSKDYHI 524
           PSESLFVGG    I +  GSK Y +
Sbjct: 20  PSESLFVGGRVVTIETDNGSKRYEL 44


>AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like
           protein-18 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 453 PSESLFVGGN-TKINSATGSKDYHI 524
           PSESLFVGG    I +  GSK Y +
Sbjct: 20  PSESLFVGGRVVTIETDNGSKRYEL 44


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +1

Query: 241 LVVKCDQEGDNTCKILCNALATA----TKAKGPEILCSRLKDVNELKLSAFYKTCDKPWS 408
           L+V  D E   T   + N L +A    T ++     C RLKD+ E KLS  +    K  +
Sbjct: 701 LIVSLDHEFRETVSCVNNCLESARTALTNSQRTVTECDRLKDIFEEKLSGGFVKDQKRQA 760

Query: 409 YANMTAEAPLCCENSQVKVCSS 474
               T  +      S  K  S+
Sbjct: 761 DNKKTTTSAAATSGSSAKSVSN 782


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +1

Query: 241 LVVKCDQEGDNTCKILCNALATA----TKAKGPEILCSRLKDVNELKLSAFYKTCDKPWS 408
           L+V  D E   T   + N L +A    T ++     C RLKD+ E KLS  +    K  +
Sbjct: 701 LIVSLDHEFRETVSCVNNCLESARTALTNSQRTVTECDRLKDIFEEKLSGGFVKDQKRQA 760

Query: 409 YANMTAEAPLCCENSQVKVCSS 474
               T  +      S  K  S+
Sbjct: 761 DNKKTTTSAAATSGSSAKSVSN 782


>AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like
           protein KLP-18 protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 453 PSESLFVGGN-TKINSATGSKDYHI 524
           PSESLFVGG    I +  GSK Y +
Sbjct: 18  PSESLFVGGRVVTIETDNGSKRYEL 42


>Z37139-5|CAA85490.1|  558|Caenorhabditis elegans Hypothetical
           protein C14B1.9 protein.
          Length = 558

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +1

Query: 286 LCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKV 465
           L N  A    AK PE + +  +D+ E    A    CDK +  A   A   +C +N + KV
Sbjct: 68  LDNIGALFDAAKNPETMKAMCRDMTEASKCATAAGCDKIFIGAISNAFQFVCMDNLE-KV 126

Query: 466 CSSVVTLK 489
            S +  ++
Sbjct: 127 SSQIACIQ 134


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 337 CSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC--SSVVTLKSTVQ 501
           C     +NE + S+  +TC     Y  + A AP+ C+ S +  C  S V     TVQ
Sbjct: 94  CQFAPSMNECQ-SSCQQTCQTSSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQ 149


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 337 CSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC--SSVVTLKSTVQ 501
           C     +NE + S+  +TC     Y  + A AP+ C+ S +  C  S V     TVQ
Sbjct: 95  CQFAPSMNECQ-SSCQQTCQTSSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQ 150


>AF016442-1|AAB65918.1|  340|Caenorhabditis elegans Hypothetical
           protein K12B6.3 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 405 ELRKHDCRSPTLLRKFPSESLFVGGNTKIN 494
           E R HDC+  T LRKF    L   G  K++
Sbjct: 137 ETRTHDCKDLTRLRKFFEAVLAYTGYAKVS 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,296,936
Number of Sequences: 27780
Number of extensions: 298748
Number of successful extensions: 880
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)