Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b04
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein pr... 45 2e-04
BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a pr... 45 2e-04
AY302071-1|AAQ74134.1| 192|Homo sapiens aprataxin variant LE5 p... 45 2e-04
AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein. 45 2e-04
AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isofor... 45 2e-04
AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isofor... 45 2e-04
AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein. 45 2e-04
AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein. 45 2e-04
AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform p... 45 2e-04
AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated dom... 45 2e-04
AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein. 45 2e-04
AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein. 45 2e-04
AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein. 45 2e-04
AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein. 45 2e-04
AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein. 45 2e-04
AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein. 45 2e-04
AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein. 45 2e-04
AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein. 45 2e-04
AY302073-1|AAQ74136.1| 85|Homo sapiens aprataxin variant LP3E5... 31 2.2
AY302069-1|AAQ74132.1| 85|Homo sapiens aprataxin variant LP3 p... 31 2.2
BC033822-1|AAH33822.1| 521|Homo sapiens polynucleotide kinase 3... 29 8.8
AY133033-1|AAM82170.1| 521|Homo sapiens polynucleotide kinase 3... 29 8.8
AF354258-1|AAK57340.1| 521|Homo sapiens polynucleotide kinase-3... 29 8.8
AF126486-1|AAD51135.1| 521|Homo sapiens polynucleotide kinase-3... 29 8.8
AF125807-1|AAD50639.1| 521|Homo sapiens DNA 5'-kinase/3'-phosph... 29 8.8
AF120499-1|AAD47379.1| 398|Homo sapiens DEM1 protein protein. 29 8.8
>BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein
protein.
Length = 292
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a
protein.
Length = 342
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AY302071-1|AAQ74134.1| 192|Homo sapiens aprataxin variant LE5
protein.
Length = 192
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein.
Length = 337
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein.
Length = 284
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform
protein.
Length = 356
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated domain
histidine-triad like protein protein.
Length = 356
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 28 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 87
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 88 GKDQEVKLQPG 98
>AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein.
Length = 247
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFAL 420
H I+LP +++GR E KI D KA K V +KQ+GVN + + +
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVI 73
Query: 421 KKDEXYEIGHG 453
KD+ ++ G
Sbjct: 74 GKDQEVKLQPG 84
>AY302073-1|AAQ74136.1| 85|Homo sapiens aprataxin variant LP3E5
protein.
Length = 85
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQ 381
H I+LP +++GR E KI D KA K V +KQ
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
>AY302069-1|AAQ74132.1| 85|Homo sapiens aprataxin variant LP3
protein.
Length = 85
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 241 HAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQ 381
H I+LP +++GR E KI D KA K V +KQ
Sbjct: 14 HQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
>BC033822-1|AAH33822.1| 521|Homo sapiens polynucleotide kinase
3'-phosphatase protein.
Length = 521
Score = 29.5 bits (63), Expect = 8.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 PIKLPXNVQ-IIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFALK 423
PI LP + Q +++GR ++ D A E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 424 KDEXYEIGHG 453
+G G
Sbjct: 81 PGLEGSLGVG 90
>AY133033-1|AAM82170.1| 521|Homo sapiens polynucleotide kinase
3'-phosphatase protein.
Length = 521
Score = 29.5 bits (63), Expect = 8.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 PIKLPXNVQ-IIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFALK 423
PI LP + Q +++GR ++ D A E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 424 KDEXYEIGHG 453
+G G
Sbjct: 81 PGLEGSLGVG 90
>AF354258-1|AAK57340.1| 521|Homo sapiens polynucleotide
kinase-3'-phosphatase protein.
Length = 521
Score = 29.5 bits (63), Expect = 8.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 PIKLPXNVQ-IIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFALK 423
PI LP + Q +++GR ++ D A E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 424 KDEXYEIGHG 453
+G G
Sbjct: 81 PGLEGSLGVG 90
>AF126486-1|AAD51135.1| 521|Homo sapiens polynucleotide
kinase-3'-phosphatase protein.
Length = 521
Score = 29.5 bits (63), Expect = 8.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 PIKLPXNVQ-IIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFALK 423
PI LP + Q +++GR ++ D A E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 424 KDEXYEIGHG 453
+G G
Sbjct: 81 PGLEGSLGVG 90
>AF125807-1|AAD50639.1| 521|Homo sapiens DNA
5'-kinase/3'-phosphatase protein.
Length = 521
Score = 29.5 bits (63), Expect = 8.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 PIKLPXNVQ-IIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFALK 423
PI LP + Q +++GR ++ D A E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 424 KDEXYEIGHG 453
+G G
Sbjct: 81 PGLEGSLGVG 90
>AF120499-1|AAD47379.1| 398|Homo sapiens DEM1 protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 8.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 PIKLPXNVQ-IIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIKQLGVNXSGLXGFALK 423
PI LP + Q +++GR ++ D A E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 424 KDEXYEIGHG 453
+G G
Sbjct: 81 PGLEGSLGVG 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,018,076
Number of Sequences: 237096
Number of extensions: 452488
Number of successful extensions: 274
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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