Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b04
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113410-1|AAM29415.1|  523|Drosophila melanogaster RE13646p pro...    44   1e-04
AE014297-743|AAF54229.2|  523|Drosophila melanogaster CG9601-PA ...    44   1e-04

>AY113410-1|AAM29415.1|  523|Drosophila melanogaster RE13646p
           protein.
          Length = 523

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 29/106 (27%), Positives = 43/106 (40%)
 Frame = +1

Query: 199 IXSRLXFLRXXLXTHAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIK 378
           + +R+  L+     H  I L    +  VGR++E  I D          +   +K  V +K
Sbjct: 18  VAARICTLKPTEPEHHSIHLTAG-ENFVGRSRETGIRDSKCSKRQIQLQVDLKKAVVSLK 76

Query: 379 QLGVNXSGLXGFALKKDEXYEIGHGSXXXXXXXXXXXXXXFXPPPE 516
            LGVN  G+ G  L ++   E+ HG               F PPPE
Sbjct: 77  VLGVNPCGVNGLMLMQNGERELKHGDLVEIVYGRHQFEVVFNPPPE 122


>AE014297-743|AAF54229.2|  523|Drosophila melanogaster CG9601-PA
           protein.
          Length = 523

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 29/106 (27%), Positives = 43/106 (40%)
 Frame = +1

Query: 199 IXSRLXFLRXXLXTHAPIKLPXNVQIIVGRNKEXKIXDXXXXXXXXXXKAXXEKXXVXIK 378
           + +R+  L+     H  I L    +  VGR++E  I D          +   +K  V +K
Sbjct: 18  VAARICTLKPTEPEHHSIHLTAG-ENFVGRSRETGIRDSKCSKRQIQLQVDLKKAVVSLK 76

Query: 379 QLGVNXSGLXGFALKKDEXYEIGHGSXXXXXXXXXXXXXXFXPPPE 516
            LGVN  G+ G  L ++   E+ HG               F PPPE
Sbjct: 77  VLGVNPCGVNGLMLMQNGERELKHGDLVEIVYGRHQFEVVFNPPPE 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,731,564
Number of Sequences: 53049
Number of extensions: 130577
Number of successful extensions: 101
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)