Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10b02
         (300 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RN98 Cluster: Putative uncharacterized protein PY0192...    33   1.7  
UniRef50_Q0QJ92 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    31   6.7  
UniRef50_Q1MNT8 Cluster: NA; n=1; Lawsonia intracellularis PHE/M...    30   8.9  
UniRef50_Q1EX26 Cluster: Probable TetR-like transcriptional regu...    30   8.9  

>UniRef50_Q7RN98 Cluster: Putative uncharacterized protein PY01922;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01922 - Plasmodium yoelii yoelii
          Length = 1614

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = +2

Query: 2   ETICILV*IIIECNNLTKLTVKCNF-----TKSERSETNSLRL-K*ILANLMYINCHLIR 163
           E I IL    I CN+ T L +  NF     T + +S      + + IL N+  +N H+  
Sbjct: 574 EDIYILATKFINCNDHTLLLLFINFLTNFYTSTIKSNQKQKNIGQNILLNMKNVNKHITN 633

Query: 164 KKK*YTNINFI*NYVTRSHI 223
            K  YTNIN   N    +HI
Sbjct: 634 VKYKYTNINLQKNNYFLNHI 653


>UniRef50_Q0QJ92 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=1; Xenos vesparum|Rep: NADH-ubiquinone oxidoreductase
           chain 5 - Xenos vesparum
          Length = 540

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 189 FILVYYFFLRIR*QLIYIRFASIYFKRSEFVSE 91
           F +++YFF  +   L Y+   ++YF+ S F+ E
Sbjct: 442 FKIIFYFFFMLGILLSYVNMKNLYFQSSMFIGE 474


>UniRef50_Q1MNT8 Cluster: NA; n=1; Lawsonia intracellularis
           PHE/MN1-00|Rep: NA - Lawsonia intracellularis (strain
           PHE/MN1-00)
          Length = 662

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
 Frame = +1

Query: 94  GNEFTTLKVNTCKPNVY*LSSNPQKKVVY*YKFHLK-------LRNTESYIST*HMVQNE 252
           G   T  + N C   +  +S++    + Y Y+ H++       LR TESYI T  +VQN+
Sbjct: 44  GKRDTYDEFNWCMKQLQSISTSLNNLIQYMYEAHIRVDTSDAILRMTESYIETFTIVQND 103

Query: 253 IIS 261
           I +
Sbjct: 104 IFN 106


>UniRef50_Q1EX26 Cluster: Probable TetR-like transcriptional
           regulator; n=1; Clostridium oremlandii OhILAs|Rep:
           Probable TetR-like transcriptional regulator -
           Clostridium oremlandii OhILAs
          Length = 195

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query: 92  SETNSLRLK*ILANLMYINCHLIRKKK*YTNINFI*NY---VTRSHILVHNIWFKMKLLV 262
           SE  ++  +  L +L+Y  C +      YTN+NF+ +Y   V    I +   WFK  L  
Sbjct: 110 SEKGNINFQKELISLIYQQCMISPSTTAYTNMNFLEDYFVFVVSGSIGLIQHWFKSGLNK 169

Query: 263 QSKE 274
            +KE
Sbjct: 170 SAKE 173


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,936,591
Number of Sequences: 1657284
Number of extensions: 3424025
Number of successful extensions: 5839
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5833
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)