Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a23
         (750 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po...    40   3e-04
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi...    36   0.006
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    28   1.2  
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ...    27   2.2  
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|...    27   2.9  
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ...    27   3.8  
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c...    25   8.7  

>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 981

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 31/131 (23%), Positives = 61/131 (46%)
 Frame = +2

Query: 137 SGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRLEEFPKNLVFEKL 316
           +G+ F +TG TG+ G   +E +++   ++  V  L+R    +   +RL     +L     
Sbjct: 643 NGQYFLLTGATGYFGRRFLEYLVKL--NIS-VVCLVRESSDEAAKERLISLVPSLRISS- 698

Query: 317 LETNTTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTVRI 496
                    + ++  +  V E   GL     + L+ENV+ + H AA + + ++ +     
Sbjct: 699 ---------ENIIVWAAHVEEIRFGLDDAKWEFLVENVSRIYHMAAEVHWMKSYQELRPA 749

Query: 497 NLLGTRQVMGL 529
           N+LGT+ V+ L
Sbjct: 750 NVLGTKTVLEL 760


>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1419

 Score = 35.9 bits (79), Expect = 0.006
 Identities = 34/144 (23%), Positives = 68/144 (47%)
 Frame = +2

Query: 143  KNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRLEEFPKNLVFEKLLE 322
            K  F+TG  G++G+ ++  ++    ++ KV  L+R    +   +RL++   +     + +
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNL-KVIALVRASSEEHGLKRLKD---SCTAYGVWD 1060

Query: 323  TNTTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTVRINL 502
             +     +K+  ++GD+   N G+  +    L E V+ VIH+ A + +          N+
Sbjct: 1061 ESWA---QKISVVNGDLALENWGIEERKWNKLTEVVDYVIHNGALVHWVYPYSKLRGPNV 1117

Query: 503  LGTRQVMGLCKEIKNLKVMIHVSS 574
            +GT   + LC   K  K +  VSS
Sbjct: 1118 MGTITALKLCSLGKG-KSLSFVSS 1140


>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 647

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 671 HLMYRQEI*LSQPPPAQGTPSRELPLNKN*HRPMKRVSSPSN 546
           H + R+     Q P    TP++    +K+  RP K+ S+PS+
Sbjct: 482 HKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQASAPSS 523


>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 255

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 140 GKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRLEE 286
           GK   ITGG+G +G  + +       +VG +Y   R KK  E +  L +
Sbjct: 9   GKTTLITGGSGGIGFSIAKAFAAAGSNVGLLY--GRNKKALEYAAELRD 55


>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 336

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 137 SGKNFFITGGTGFVGLCLIEKILR 208
           SGK   +TG TGF+G  + E++L+
Sbjct: 2   SGKLVLVTGVTGFIGAHVAEQLLQ 25


>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 2344

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 191  IEKILRCIPDVGKVYLLMRPKKGKEISQRLEE 286
            +EKIL+  PDV  +YL   P +   I Q L++
Sbjct: 2113 VEKILKSYPDVHVIYLCCDPSR-LNIEQELQK 2143


>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1077

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 53  PVNHSYISQDTPEGRNKMTEESLVRAFYSGKNFF 154
           P+  S++  DT    N    ESL+R F  G++FF
Sbjct: 358 PIGGSWVEHDT----NIPNGESLIRQFLLGQHFF 387


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,810,189
Number of Sequences: 5004
Number of extensions: 53768
Number of successful extensions: 132
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)