Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a20
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 28 4.7
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 28 4.7
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 28 4.7
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 28 6.2
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 28 6.2
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 28 6.2
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 28 6.2
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 222 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 260
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 124 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 162
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 VVNKMMNSVEFSD-VNFIPASGGSTVPASETISIAADDS 369
V N+ + D V I ASGGS+VP++ + ++++DD+
Sbjct: 222 VKNRSTGKLRIGDCVVAIDASGGSSVPSAPSSTVSSDDT 260
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 347 IVSEAGTVLPPEAGMKLTSENSTEFIILFTTGDSESG 237
I EAG VLP +K S+ ++ +LF T + +SG
Sbjct: 213 IQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSG 249
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 347 IVSEAGTVLPPEAGMKLTSENSTEFIILFTTGDSESG 237
I EAG VLP +K S+ ++ +LF T + +SG
Sbjct: 148 IQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSG 184
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +1
Query: 181 PYEQKSDEGNILDEIFTIVPDSESPVVNKMMNSVEFSDVNFI 306
P+E S E +IL ++ + PD + ++ N + + ++F+
Sbjct: 796 PWEHSSTENSILTALYHVTPDDKRRIIRAAQNPMRPTILSFL 837
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 292 RKTQQNSSFYLLQEILNLVRL*K-SHPVCFLHQTFVHMEHGYRLLRHQNRKIK 137
+K+Q+N +++ ++ + SH +CF + GY + + Q RKI+
Sbjct: 1516 KKSQKNQRSQKKSDLVEKTQIKEFSHRICFSVEPVAECRRGYEVEQQQQRKIR 1568
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 292 RKTQQNSSFYLLQEILNLVRL*K-SHPVCFLHQTFVHMEHGYRLLRHQNRKIK 137
+K+Q+N +++ ++ + SH +CF + GY + + Q RKI+
Sbjct: 1461 KKSQKNQRSQKKSDLVEKTQIKEFSHRICFSVEPVAECRRGYEVEQQQQRKIR 1513
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 292 RKTQQNSSFYLLQEILNLVRL*K-SHPVCFLHQTFVHMEHGYRLLRHQNRKIK 137
+K+Q+N +++ ++ + SH +CF + GY + + Q RKI+
Sbjct: 1516 KKSQKNQRSQKKSDLVEKTQIKEFSHRICFSVEPVAECRRGYEVEQQQQRKIR 1568
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 160 EANDTRVPYEQKSDEGNILDEIFTIVPDSESPVVNKMMNSVEFSDVNF 303
E D + + KS+E L ++ P+S ++ + S+EF D+NF
Sbjct: 179 ENADEKEKEQLKSEEIQHLCQVLAYEPNSSDIWLDVALKSIEFGDLNF 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,120,303
Number of Sequences: 27780
Number of extensions: 254865
Number of successful extensions: 783
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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