Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a18
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 34 0.13
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 33 0.22
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 33 0.22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 32 0.38
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 31 1.2
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 31 1.2
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 29 3.6
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 29 3.6
Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical pr... 29 4.7
U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical ... 29 4.7
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 28 8.2
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 28 8.2
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 28 8.2
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGT--ATTDL---NHDILYREGQTSRNEV 279
REI+ +Q G N +G+ FW + E GT TDL D+ Y E N
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEA----NNG 57
Query: 280 TYTPRLLIADLKGALKTLPQSG 345
Y PR ++ DL+ +SG
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSG 79
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 655 DNIRKYVEECDSMQGFQINFDCXDG 729
D IRK E CD +QGFQ+ G
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGG 142
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 279
REI+ +Q G N +G+ FW + E D SG +DL + + Y E +++
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK--- 58
Query: 280 TYTPRLLIADLKGALKTLPQSG 345
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLVDLEPGTMDSVRSG 79
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 279
REI+ +Q G N +G+ FW + E D SG +DL + + Y E +++
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK--- 58
Query: 280 TYTPRLLIADLKGALKTLPQSG 345
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLVDLEPGTMDSVRSG 79
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 291
REI+ +Q G N +GA FW + T + + D+ NE + Y P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVP 61
Query: 292 RLLIADLK 315
R + DL+
Sbjct: 62 RACLVDLE 69
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 655 DNIRKYVEECDSMQGFQINFDCXDG 729
D +RK E CD +QGFQ+ G
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGG 142
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGT--ATTDL---NHDILYREGQTSRNEV 279
REI+ +Q G N +G+ FW + E GT +DL D+ Y E N
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEA----NNG 57
Query: 280 TYTPRLLIADLKGALKTLPQSG 345
Y PR ++ DL+ +SG
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSG 79
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 655 DNIRKYVEECDSMQGFQINFDCXDG 729
D IRK E CD +QGFQ+ G
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGG 142
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 291
REI+ +Q G N +GA FW + T D+ NE Y P
Sbjct: 2 REIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVP 61
Query: 292 RLLIADLKGALKTLPQSG 345
R ++ DL+ +SG
Sbjct: 62 RAVLVDLEPGTMDSVRSG 79
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 655 DNIRKYVEECDSMQGFQINFDCXDG 729
D +RK E CD +QGFQ+ G
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGG 142
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWN-IQE---LSFD--YSGTATTDLNHDILYREGQTSRNEVT 282
+EI+ +Q G N +GA FW I E L D Y G + L Y + R
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK--- 58
Query: 283 YTPRLLIADL 312
Y PR ++ DL
Sbjct: 59 YVPRAILVDL 68
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +1
Query: 121 REILTLQFGHYSNYVGAHFWN-IQE---LSFD--YSGTATTDLNHDILYREGQTSRNEVT 282
+EI+ +Q G N +GA FW I E L D Y G + L Y + R
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK--- 58
Query: 283 YTPRLLIADL 312
Y PR ++ DL
Sbjct: 59 YVPRAILVDL 68
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +1
Query: 73 HTKNCSCI*FNLKMSTREILTLQFGH--YSNYVGAHFWNIQELSFDYS----GTATTDLN 234
+ +N +C+ F + + ++ G+ YS Y G H +Q+L+ DY+ GTA ++
Sbjct: 64 YLENHTCLKFEYNENAETAVRIRKGNGCYSLY-GMHAGEVQDLTLDYNCASFGTAVHEIM 122
Query: 235 HDILYREGQTSRNEVTY 285
H + GQ + Y
Sbjct: 123 HALGIAHGQARSDRDDY 139
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 586 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI 708
++A + Y GR + D+ D +++ E C+ +QGF I
Sbjct: 103 EDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVI 143
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 586 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI 708
++A + Y G + D+ D +R+ E C S+QGF I
Sbjct: 97 EDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLI 137
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 586 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI 708
++A + Y G + D+ D IRK E C+ +QGF +
Sbjct: 100 EDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLV 140
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 586 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI 708
++A + Y GR + D+ D +++ E C+ +QGF I
Sbjct: 75 EDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVI 115
>Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical
protein F40G12.4 protein.
Length = 264
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Frame = +1
Query: 307 DLKGALKTLPQSGGLSD----------DAQETDLQWDTVEKIEEPPPEKN--QYLAAIDS 450
+L AL +P GG SD DAQ+T ++W+ +++E P KN Q +A
Sbjct: 98 ELVDALSFIPAHGGCSDTYYRLNAQRCDAQKTMMEWEIEKQLERLPKFKNSTQVIAMCRE 157
Query: 451 VQTTVAD 471
++ + D
Sbjct: 158 IKECMED 164
>U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical
protein F28A12.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -2
Query: 606 IDVKSFLITSVLILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISYCCLNRINSSEI 430
I + +FL+ ++ILI Y +S ++I I V F S++ C LN + +S I
Sbjct: 67 ISILAFLVYQIVILIQYFYSKPTLSQINFITNEG-----AVYFPSVTVCNLNPVKTSFI 120
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 556 VVNEYQHGSNKEAFDIYPTGRGVWKSDYGDLFSDNIRKYV 675
VV +Y E+FDIYP+G + K D F + YV
Sbjct: 2 VVEKYLEDEELESFDIYPSGWTICKDILHDSFHRLLYFYV 41
>AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical
protein C07H6.9 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = -2
Query: 630 FPYSSTSGIDVKSFLITSVLILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISYCCLN 451
F Y S I F +TS+LI+IY+I + ++ R+ VI + + K+V+ +S + +
Sbjct: 28 FVYLSLVYIQFSLFFLTSILIVIYFISYNGVQ-RLNVITITTNFI-KMVVDVS-CFGTIY 84
Query: 450 RINSSEIL 427
+ SS+IL
Sbjct: 85 FVGSSKIL 92
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 331 EFLKPLSNQLSVIWVCKLLHSSTFDPLGIKYRD 233
EF + S Q + +VC+L H D LG++Y+D
Sbjct: 44 EFPRTQSAQTILDYVCQLKHIQEKDFLGLRYQD 76
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 331 EFLKPLSNQLSVIWVCKLLHSSTFDPLGIKYRD 233
EF + S Q + +VC+L H D LG++Y+D
Sbjct: 44 EFPRTQSAQTILDYVCQLKHIQEKDFLGLRYQD 76
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 586 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI 708
++A + Y G + D+ D +R+ VE C +QGF +
Sbjct: 102 EDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLV 142
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -3
Query: 380 CKSVSCASSERPPLCGRVFKAPF---KSAISN 294
CK V S E+ P CG + ++PF K A++N
Sbjct: 198 CKLVQDLSREQQPPCGLILESPFNNLKDAVTN 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,992,215
Number of Sequences: 27780
Number of extensions: 366517
Number of successful extensions: 1111
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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