Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a17
(774 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0672 - 10325935-10326150,10326308-10326400,10326568-103267... 90 2e-18
01_06_1209 + 35427160-35427318,35427436-35427501,35427737-354278... 78 9e-15
03_02_0673 - 10328994-10329281 43 3e-04
10_08_0372 + 17280560-17280811,17280901-17281065,17281305-172814... 34 0.14
05_01_0258 + 1984666-1984878,1985019-1985852 31 0.77
12_01_1061 + 10964571-10964927,10965393-10965425,10965865-109659... 29 3.1
08_02_0244 - 14717897-14718037,14719054-14719155,14719238-147193... 29 4.1
06_03_0188 - 17691582-17692241 29 4.1
01_06_0307 - 28361538-28361606,28361684-28361854,28361963-283620... 29 4.1
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610... 29 4.1
04_04_1242 - 32016553-32016857,32017628-32017784,32017871-320180... 29 5.4
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 5.4
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 28 7.2
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 28 7.2
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 28 7.2
>03_02_0672 -
10325935-10326150,10326308-10326400,10326568-10326708,
10326828-10326893,10327099-10327359
Length = 258
Score = 90.2 bits (214), Expect = 2e-18
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Frame = +3
Query: 108 LRLVCFLMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRD-FRGLVKVK 284
L L L+L V KK KV +A+YYESLCP S F+ LA V+RD V +
Sbjct: 11 LLLAAILLLAAGAVEGKK--GGKVDVALYYESLCPYSAMFVVGSLAKVFRDGLLDAVDLS 68
Query: 285 MVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICL--MNQT 458
+VPYG + DGK S HG++EC+ N V+AC + D + C+ +
Sbjct: 69 LVPYGNAR--VKDGKISCQVEHGSEECFLNTVEACAI-DAWPDLRVHFRFIYCVEDLVVN 125
Query: 459 SPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEK 638
+ ++C +++ + + C E+G L YG +TDA+ P +VP V++
Sbjct: 126 HKQREWESCFGKLN--LDPKPVTDCYKGERGHQLSLKYGRQTDALQPPHKYVPWVVV--- 180
Query: 639 YDKDVETQAFENLKAVVCRVATPQ-PSIC 722
D + +EN +A +C+ P +C
Sbjct: 181 -DGQPLYEDYENFEAYICKAYKGHPPKVC 208
>01_06_1209 +
35427160-35427318,35427436-35427501,35427737-35427877,
35428342-35428434,35428530-35428646,35428890-35429054
Length = 246
Score = 77.8 bits (183), Expect = 9e-15
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = +3
Query: 183 IAVYYESLCPDSKKFITTQLAPVWRD-FRGLVKVKMVPYGKSTHDKVDGKWSFICHHGAD 359
++VYYE+LCP F+ LA ++RD +V +++VP+G + +V S C HG +
Sbjct: 1 MSVYYETLCPFCSGFVVNDLARIFRDGLSPVVDLRLVPFG---NGRVSPDGSITCQHGEE 57
Query: 360 ECYGNKVQACVLKDRNLQDTEK-MEIVICLMNQTSPDK--SLDTCLTQVDKMSESDKLKR 530
EC N ++ACV+ R D E+ + C+ + K + +C + S+ +
Sbjct: 58 ECQLNAIEACVI--RLWPDAEQHFPFINCIEHLALTQKWNAWQSCFQETGLASQ--PVMD 113
Query: 531 CASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVVCRVATPQ 710
C +S G L Y +T+A+ P FVP V +N + D + N +A +CR +
Sbjct: 114 CYNSGYGTQLQLQYAAETNALQPPHQFVPWVTVNGRPLGD----DYTNFEAYICRAYDGE 169
Query: 711 -PSIC 722
P C
Sbjct: 170 LPEAC 174
>03_02_0673 - 10328994-10329281
Length = 95
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 174 KVKIAVYYESLCPDSKKFITTQLAPVWRD-FRGLVKVKMVPYGKS 305
KV +A+YYE+LCP +FI LA ++ D V +++VPYG +
Sbjct: 38 KVPLALYYETLCPYCSRFIVNHLAGIFEDGIVDAVDLRLVPYGNA 82
>10_08_0372 +
17280560-17280811,17280901-17281065,17281305-17281410,
17281432-17281487,17281607-17282201,17282863-17282975,
17283106-17283326,17284113-17284437
Length = 610
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Frame = +3
Query: 192 YYESLCPDSKKFITTQLAPV--------WRDFRGLVKVKMVPYGKSTHDKVDGKWSFIC- 344
+YE CP ++ + + P W R +V +P+ H+K D W
Sbjct: 116 HYERHCPPPERRLNCLIPPPHGYKVPIKWPKSRDIVWKANIPHTHLAHEKSDQNWMIDAG 175
Query: 345 -----HHGADECYGNKVQACVLKDRNLQDTEKMEIVI 440
HHGAD+ N KD N+ + + V+
Sbjct: 176 GGTHFHHGADKYIANIANMLKFKDNNINNEGMLRTVL 212
>05_01_0258 + 1984666-1984878,1985019-1985852
Length = 348
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 LRLVCFLMLLCYVVAKKKT-EDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRG 269
++LVCF++++ A D ++K+ YYE C D +K + + + +D RG
Sbjct: 2 VKLVCFVVVVFMAAAAAMAGADRELKVG-YYEKTCKDVEKIVNSIVVNSIKDNRG 55
>12_01_1061 +
10964571-10964927,10965393-10965425,10965865-10965909,
10966209-10966220
Length = 148
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 399 DRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQV 497
D NL TEK IC+ Q S +K + + +T V
Sbjct: 107 DTNLDSTEKSPATICISKQRSIEKMVTSTITSV 139
>08_02_0244 -
14717897-14718037,14719054-14719155,14719238-14719309,
14719369-14719480,14719640-14719707,14719801-14719908,
14720659-14721078,14722077-14722161,14723068-14723147,
14723336-14723413,14724074-14724213,14724324-14724738
Length = 606
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 598 LITASVLSPYDASRLSPCSLDAHLFSLSDSDILST*VKHVSKDLSGLVWFMRHITI 431
++ +V P ++ CS + + L DI+S + VS D+S L +R I +
Sbjct: 198 MVAVAVAQPQHGTQTVSCSKCRYQYELFSGDIMSIESEEVSMDISALDKALRFINV 253
>06_03_0188 - 17691582-17692241
Length = 219
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 602 SRVRAHRYY*REIRQRCRNSSLRELEGG 685
S + RY E R R RN LRE+EGG
Sbjct: 186 SLLSLRRYEREETRSRRRNQGLREIEGG 213
>01_06_0307 -
28361538-28361606,28361684-28361854,28361963-28362027,
28362467-28362565,28363005-28363099,28363199-28363413,
28364394-28364735,28365505-28365645,28365774-28365945,
28366073-28366176,28366799-28366911,28367158-28367222,
28367564-28367691
Length = 592
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -2
Query: 602 RSHHSIRFITVRREQIVSLFTGCASFQFIRLRHLVYLS*ARVQRLVGAGLVHEAYYNLHL 423
R+ ++ I +R+E + L TG S IR+ H++ R Q ++ A + E + L
Sbjct: 73 RNRRELQLINMRKEMVQYLQTGQESIARIRVEHII-----REQNILAAYEIVELFCEFVL 127
Query: 422 LRVLEVAVLQD 390
RV V V ++
Sbjct: 128 ARVPIVEVQKE 138
>01_05_0439 -
22159425-22159520,22160137-22160345,22161028-22161066,
22161196-22161356,22161447-22161518,22162002-22162183,
22162580-22162703,22164196-22164299,22165526-22165725,
22165838-22166069,22166156-22166239,22166329-22166386,
22166724-22166771,22167924-22168081,22168451-22168501,
22168585-22168658,22168760-22168835,22169685-22169729,
22169833-22169899,22169978-22170095,22170580-22170775,
22171551-22171640,22171985-22172039,22172755-22172975,
22173362-22173454,22173608-22173721,22173918-22173981,
22174081-22174181,22174306-22174447,22174528-22174729,
22174883-22174976,22176172-22176348
Length = 1248
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 462 PDKSLDTCLTQVDKMSESDKLKRCASSEQG-DNLLASYGDKTDAVMRPLAFVPT 620
P +S+ + ++ D L+RC ++E+ +NLL D T PLA P+
Sbjct: 445 PVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLDKLQDATGRGQNPLAIFPS 498
>04_04_1242 -
32016553-32016857,32017628-32017784,32017871-32018089,
32018184-32018470,32018629-32019934,32020021-32020178,
32020250-32020335,32023106-32023173,32023297-32023340,
32023418-32023490,32023605-32023684,32023774-32023867,
32023981-32024151,32024463-32024557,32025049-32025128,
32025137-32025333,32025896-32026183
Length = 1235
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 541 LDAHLFSLSDSDILST*VKHVSKDLSGLVWFMR--HITISIFSV 416
LD L +S+ LS+ + + SGL+W H+ IS+FSV
Sbjct: 115 LDLVLVEKDNSEDLSSTSRQIHSSGSGLIWLNEHSHLLISVFSV 158
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 389 RPEGPQPPGHGEDGDCNMPHEPDQP 463
RP P PP ED + PH PD P
Sbjct: 118 RPPPPPPPHPPEDPPPHPPHPPDHP 142
>08_02_1426 +
27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 429 EIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDN 557
E+V+ L Q +PD DTCL + + +++ E G N
Sbjct: 449 ELVMELARQLNPDNCEDTCLKKKEDSQDTEGSTHRKQQEDGQN 491
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 171 GLRFSSSPRHNRAASESKPAGESSSCCFISGKKT 70
G F + P R S KP G+SS+ ISG T
Sbjct: 675 GATFGTKPSPARPPSARKPLGQSSNANIISGTPT 708
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 28.3 bits (60), Expect = 7.2
Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Frame = +3
Query: 291 PYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDK 470
PYG + + C H A G ++ A VL+ D+ + CL+N S
Sbjct: 624 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY-DSSAYFVANCLINMYSKCG 682
Query: 471 SLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAV--MRPLAFVP 617
+DT D MS+ + S G + + D MR FVP
Sbjct: 683 DVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 732
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,340,161
Number of Sequences: 37544
Number of extensions: 491723
Number of successful extensions: 1425
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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