Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a17
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical pr... 99 3e-21
L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical pr... 99 3e-21
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 78 6e-15
Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical p... 66 3e-11
AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical ... 64 8e-11
Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 33 0.17
Z71259-2|CAA95790.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.69
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 31 1.2
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 28 6.4
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 8.5
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 28 8.5
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 8.5
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 8.5
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 28 8.5
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 28 8.5
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 8.5
>L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical
protein C02D5.2b protein.
Length = 263
Score = 99.1 bits (236), Expect = 3e-21
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGL--VKVKMVPYGKSTHDKVDGK 329
K+ ++ VK+ VY E+ CPD+ +F QL W L +++ ++P+GK+ +
Sbjct: 72 KEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGND 131
Query: 330 WSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMS 509
+ C HG EC N++ CV+ DR + V+C+ + S D+++ C+T+ + S
Sbjct: 132 FECQCQHGPTECQINQLMNCVI-DRFGFPHRYLPGVLCMQGKYSLDEAMK-CVTE-NYPS 188
Query: 510 ESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVV 689
E ++++ CAS +G LLA G KT ++ + F+P ++IN + D A +L V
Sbjct: 189 EYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSD----ALYDLTQNV 244
Query: 690 CRVATPQPSIC 722
C P PS C
Sbjct: 245 CEAMQPMPSAC 255
>L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical
protein C02D5.2a protein.
Length = 323
Score = 99.1 bits (236), Expect = 3e-21
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGL--VKVKMVPYGKSTHDKVDGK 329
K+ ++ VK+ VY E+ CPD+ +F QL W L +++ ++P+GK+ +
Sbjct: 132 KEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGND 191
Query: 330 WSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMS 509
+ C HG EC N++ CV+ DR + V+C+ + S D+++ C+T+ + S
Sbjct: 192 FECQCQHGPTECQINQLMNCVI-DRFGFPHRYLPGVLCMQGKYSLDEAMK-CVTE-NYPS 248
Query: 510 ESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVV 689
E ++++ CAS +G LLA G KT ++ + F+P ++IN + D A +L V
Sbjct: 249 EYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVINGSRNSD----ALYDLTQNV 304
Query: 690 CRVATPQPSIC 722
C P PS C
Sbjct: 305 CEAMQPMPSAC 315
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 81.4 bits (192), Expect = 7e-16
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Frame = +3
Query: 177 VKIAVYYESLCPDSKKFITTQLAPVWRDFRG--LVKVKMVPYG-KSTHDKVDGKWSFICH 347
+ I + ESLCPD+ ++ + PVW + + + P+G S + C
Sbjct: 74 INIEFFGESLCPDTTRYFRNHIMPVWTSLQASSTINITYHPFGLASCRRSAETGIRCNCQ 133
Query: 348 HGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDK-- 521
HG EC N +QACV+ + + IV C+ + ++D C+ + D+
Sbjct: 134 HGPAECQLNMLQACVISTLQVPQLY-LPIVNCMQGKNKFSSAVDDCIVNFRPRPDLDENF 192
Query: 522 LKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFENLKAVVCRVA 701
+ RCA S+ G L+ +G + V L +VP ++IN + + E Q LK +VC+ +
Sbjct: 193 MARCAQSQLGAKLMMQHGYRQKEVASELDWVPWILINGRRSQAAENQ----LKTIVCQFS 248
Query: 702 -TPQPSICS*NE 734
T + C E
Sbjct: 249 ETSKQEYCKTQE 260
>AF077534-7|AAK71376.1| 319|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 48
protein.
Length = 319
Score = 78.2 bits (184), Expect = 6e-15
Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Frame = +3
Query: 177 VKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWSFICHHGA 356
+KI + YE+LCP +KFI QL V+ F+G + +++VP+G S + DG SF C+HG
Sbjct: 141 IKITLIYEALCPYCQKFIANQLGSVFNQFQGQLILELVPWGNSRIMR-DG--SFSCNHGQ 197
Query: 357 DECYGNKVQACVLKDRNLQDTEKMEIVICL---MNQTSPDKSLDTCLTQVDKMSESDKLK 527
EC N++Q+CV+ ++ + ++C + + ++ TC + S+ +++
Sbjct: 198 KECDANRLQSCVIDILKVKGA--LPFIVCFERNIQHYGVEHAMQTCSAFI--RSQYRQIR 253
Query: 528 RCASSEQGDNLLASYGDKTDAVM-RPLAFVPTVIINE 635
+C +G L KT + P+ VP ++IN+
Sbjct: 254 QCYDGPRGVQLQREAAQKTMSTRPNPILEVPYLLIND 290
>Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical
protein ZK669.3 protein.
Length = 218
Score = 71.3 bits (167), Expect = 7e-13
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 7/210 (3%)
Frame = +3
Query: 114 LVCFLMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDF--RGLVKVKM 287
L+ F+ + Y K D V I + E C D+ ++ P+WR G +
Sbjct: 11 LILFITKISYAKDKGANGD-MVNIVAFGEGRCSDTSYWMKWHWLPMWRMLGSTGRINFDY 69
Query: 288 VPYG-KSTHDKVDGKWSFIC--HHGADECYGNKVQACVLKD-RNLQDTEKMEIVICLMNQ 455
PYG K+T + +C HHG EC N++QACV++ N +D ME+V C+ +
Sbjct: 70 HPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPNFED--YMEVVTCIQGK 127
Query: 456 TSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINE 635
+ + + C K+ + K+ CA S G L + + + + + P ++IN
Sbjct: 128 QNISMAAEVCFEGPTKLDRT-KMMECAESRHGRKLFSDQENIVAQMAPEMDWAPWILING 186
Query: 636 KYDKDVETQAFENLKAVVC-RVATPQPSIC 722
K+ E E+L +C R P+P C
Sbjct: 187 TRYKEAE----EDLWQFLCDRFIDPRPIHC 212
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 70.1 bits (164), Expect = 2e-12
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Frame = +3
Query: 162 TEDHKVKIAVYYESLCPDSKKFITTQLAP-VWRDFRGLVKVKMVPYGKSTHDKVDGKWSF 338
T + K+ I V E+LCPD + F+T QL P V+++F V +++VP+G + KV +
Sbjct: 71 THNQKINITVLIEALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNA---KVLEDGTI 127
Query: 339 ICHHGADECYGNKVQACVLKDRNLQDTEKMEIVIC----LMNQTSPDKSLDTCLTQVDKM 506
C HG +EC NK + C + ++QD + + C L + ++ C ++
Sbjct: 128 KCQHGEEECSINKFEGCFID--SMQDQSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIG 185
Query: 507 SESDKL-KRCASSEQGDNLLASYGDKTDAVM-RPLAFVPTVIIN 632
+ +L + C S+ G +L T V FVP VIIN
Sbjct: 186 GDIQRLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIIN 229
>Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical
protein R07E5.4 protein.
Length = 186
Score = 65.7 bits (153), Expect = 3e-11
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Frame = +3
Query: 126 LMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKS 305
L+LL + + +V + ++ ES CP K + Q+ P + + G++ +++VP+GK
Sbjct: 2 LVLLVAFLFPVLLQAQQVNVTIFTESQCPYCTKLLREQIWPFYVNRPGIMNLQIVPFGKG 61
Query: 306 --THDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLD 479
T+D + + C HGA EC N++Q C + + + +V CL T+ +
Sbjct: 62 DCTYD-YNRNFHCTCMHGATECDLNRLQNCAI---SYFPRRHLGLVTCLQGLTTLREGFS 117
Query: 480 TCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIIN 632
CL+++ ++ KL CA+++ G+ L +Y + + PT+ +N
Sbjct: 118 KCLSRLSPNTQR-KLIECATTQTGE--LLNYYSMVNTHRAGVRIWPTMYVN 165
>AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical
protein Y18D10A.2 protein.
Length = 220
Score = 64.5 bits (150), Expect = 8e-11
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Frame = +3
Query: 183 IAVYYESLCPDSKKFITTQLAPVWRDFRGLVK--VKMVPYGKST-HDKVDGKWSFICHHG 353
+ V+ S CPD+ KFI QL P +++++G + +K+ + T +VDGK+ C HG
Sbjct: 39 VEVFGISRCPDTSKFIHNQLVPFYQNYKGNLSDGLKLDFHAVPTGGHQVDGKYVNRCLHG 98
Query: 354 ADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRC 533
A EC NK+Q C K QD + C+ +T+ L CL + E ++ C
Sbjct: 99 ALECALNKLQMC-SKKHIKQDW--LVTAGCIQGKTAYSAGL-KCLPDTE---EGKIVQNC 151
Query: 534 ASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVE 656
A SE+G+ LL V A++P + +N + +++ E
Sbjct: 152 AESEEGEYLLNDENSYRYNVAPHSAWLPWIQVNGERNRNAE 192
>Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical
protein W04A4.3 protein.
Length = 149
Score = 42.3 bits (95), Expect = 4e-04
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +3
Query: 207 CPDSKKFITTQLAPVWRDF---RGLVKVKMVPYGKSTHDKV-DGKWSFICHHGADECYGN 374
C + K+ TQLAP + +G +KMV + S K +G C +G EC N
Sbjct: 44 CALTTKWFRTQLAPFLGNLTAKKGPKNLKMVYHPLSIGQKKGNGTAVATCENGWLECQLN 103
Query: 375 KVQACVLK-DRNLQDTEKMEIVICLMNQTSPDKSLDTCL 488
K+Q C K RN+ D E + ++ C+ + K+LD CL
Sbjct: 104 KLQCCTKKYSRNVTDFEILAVLECIQGKQWFGKALD-CL 141
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 401 PQPPG-HGEDGDCNMPHEPDQPRQVFGHVLNSS 496
P PPG +G+ GDC MP P +PR L+ S
Sbjct: 560 PGPPGPNGDHGDCGMPGAPGKPRSAGSDGLSGS 592
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 216 SKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS---FICHHGA 356
++K TT L P +VK+ PYG +T ++ GKW FI HH A
Sbjct: 150 TRKTTTTTLRPTKPRPMTKPRVKVCPYGWATFNRPSGKWCIKVFIGHHAA 199
>Z71259-2|CAA95790.1| 336|Caenorhabditis elegans Hypothetical
protein F13G3.2 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 314 VVRALPIRDHFDFDKSSEVPPDGSQLRRYKLFAVRTKGFVIDRYFDFMVFGFLLRH--DI 141
VVRA +++H +D S P G R F T I YF ++ F++R +
Sbjct: 162 VVRAQSVKEHSTYDLSIYAPFSGFSDTRSFQFLFVTAAIAIGAYFVPLMSVFVIRKIMIV 221
Query: 140 TEQHQKANQPESLHLVVL 87
T+ H K ++ H +L
Sbjct: 222 TKAHSKMSENTKRHTRML 239
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 401 PQPPG-HGEDGDCNMPHEPDQP 463
P PPG +G+ GDC MP P +P
Sbjct: 559 PGPPGPNGDHGDCGMPGAPGKP 580
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 153 KKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMV--PYGKSTHDKVDG 326
KK E+H + +S P SK+ ITT L W D VK + G T +DG
Sbjct: 643 KKIVEEHLQALDARGQSKLPASKQKITTYLNVGWDDIAAKVKAILSGGAGGALTERLIDG 702
Query: 327 KW-SFICHHGADECY-GNKVQA 386
K I DE + G KV++
Sbjct: 703 KTKKVITMDNGDEGFMGAKVES 724
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 474 LDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDK 581
+DT +TQ K ++ KR A ++QG+ L A +K
Sbjct: 450 VDTFMTQYKKHAQKKLAKRAAQNQQGEKLAAEEKEK 485
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 392 PEGPQPPGHGEDGDCNMPHEPDQPR 466
P GPQ PG G ++P P PR
Sbjct: 243 PPGPQVPGSYPSGPADIPQGPGMPR 267
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 378 VQACVLKDRNLQDTEKMEIVICLMN--QTSPDKSLDTCLTQVDKMSESD 518
V+ V K RN+ D + ++ CL + Q+SPD + T +T K +E D
Sbjct: 920 VRIAVAKGRNIDDEPSLPLLECLRSRAQSSPDHRILTLVT--SKNAEQD 966
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 628 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 682
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 1341 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 1395
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical
protein C09D8.1c protein.
Length = 1216
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 377 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 431
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 628 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 682
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 1341 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 1395
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 465 DKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMR 599
DK++ + D +S D K A S+ + +YGDK AV R
Sbjct: 86 DKTVSAVFSLRDSVSADDVQKVLAGSKLVSQVETTYGDKATAVCR 130
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 465 DKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMR 599
DK++ + D +S D K A S+ + +YGDK AV R
Sbjct: 99 DKTVSAVFSLRDSVSADDVQKVLAGSKLVSQVETTYGDKATAVCR 143
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 381 QACVLKDRNLQDTE-KMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASS 542
Q C + Q+ K +V C M S SL T +D+M +++ RC SS
Sbjct: 1522 QLCRIASEKTQNPNVKKHLVGCAMGVASKTSSLVTAFKDLDRMPDAE--SRCTSS 1574
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 648 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 702
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 504 MSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTVIINEKYDKDVETQAFEN 674
+S S KLKR AS D+ ASY K R A VP + + D Q + N
Sbjct: 1361 VSPSKKLKRKASEVGDDSQSASYHPKEKRARR--ATVPGAYVTARLSADRVKQQYRN 1415
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 381 QACVLKDRNLQDTE-KMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASS 542
Q C + Q+ K +V C M S SL T +D+M +++ RC SS
Sbjct: 1522 QLCRIASEKTQNPNVKKHLVGCAMGVASKTSSLVTAFKDLDRMPDAE--SRCTSS 1574
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,527,870
Number of Sequences: 27780
Number of extensions: 406955
Number of successful extensions: 1268
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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