Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a16
         (533 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58550| Best HMM Match : DUF1065 (HMM E-Value=0.15)                  27   7.3  
SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)                   27   9.6  
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  

>SB_58550| Best HMM Match : DUF1065 (HMM E-Value=0.15)
          Length = 624

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 196 ILFNIGSTFPPIKLLATLTNENSFCILPDVKLYCTIDSIVY 74
           +LF +   FPP+ +  +L   N +  +P +K  C + S +Y
Sbjct: 164 LLFLVALIFPPLWVYLSLPVLNRYQYIPIIKFICQLISHLY 204


>SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)
          Length = 1188

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 138 LVKVANSLIGGNVLPILNRISQPSVTNFVKPVIPLVTQ 251
           LV     ++  NV P+L  I +P + + V+PV+  + +
Sbjct: 579 LVSSVEPVLASNVEPVLASIVEPVLASIVEPVLASIVE 616


>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 757

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 240 LVTQISGIKIKGRVRRRCRSCY 305
           ++TQ+S   +  RVR RCR+CY
Sbjct: 70  MITQVS--PLGARVRMRCRNCY 89


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,330,777
Number of Sequences: 59808
Number of extensions: 295338
Number of successful extensions: 542
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)