Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a15
(810 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30820.1 68415.m03758 expressed protein 31 0.90
At2g24300.2 68415.m02904 calmodulin-binding protein similar to c... 30 2.1
At2g24300.1 68415.m02905 calmodulin-binding protein similar to c... 30 2.1
At3g62010.1 68416.m06964 expressed protein 29 2.8
At4g14310.2 68417.m02205 peroxisomal membrane protein-related co... 29 3.7
At2g23070.1 68415.m02750 casein kinase II alpha chain, putative ... 29 4.8
At5g18410.2 68418.m02167 expressed protein similar to p53 induci... 28 8.4
At5g18410.1 68418.m02166 expressed protein similar to p53 induci... 28 8.4
At5g12180.1 68418.m01429 calcium-dependent protein kinase, putat... 28 8.4
>At2g30820.1 68415.m03758 expressed protein
Length = 421
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 511 DGTFSGSNCNTATRPVDLNEKNEHLERYFRSAEIWSDRNCGSSGLFFFDAKK*FPCPQM 687
D F +C P+++ ++ LE + S +C S +F + KK PC +M
Sbjct: 68 DAQFLKVSCEIPATPIEVRNTSKKLETPKGGEHLRSSPSCNSEVVFHLNEKKNEPCEEM 126
>At2g24300.2 68415.m02904 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 599
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 716 KLHNRSSRLFICGHGNYFFASKKNNPLD-PQFRSLHISAL 600
+LHN+++R + GH N S P+D PQF H + L
Sbjct: 415 QLHNQNNRQTVQGHQNAITYSPVPQPIDYPQFAQQHCNQL 454
>At2g24300.1 68415.m02905 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 552
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 716 KLHNRSSRLFICGHGNYFFASKKNNPLD-PQFRSLHISAL 600
+LHN+++R + GH N S P+D PQF H + L
Sbjct: 368 QLHNQNNRQTVQGHQNAITYSPVPQPIDYPQFAQQHCNQL 407
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +1
Query: 382 NDILMNSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANSNSDGTFSGSNCNTATRPVD 561
+DIL+ F +G+++ + ++N+ +A F+ + R
Sbjct: 723 DDILLLWKITRLFDNGVESREALDAVIDRCSALQNIREAVLQYRKVFNQQHVEPRVRSAA 782
Query: 562 LNEKNEHLERYFR 600
L E+LERYFR
Sbjct: 783 LKRGAEYLERYFR 795
>At4g14310.2 68417.m02205 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 965
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 485 IYHKRILIQMVHLVEVIVIPQRGLSI*TKKTNTWRDISVVRKYGAIG 625
+Y + VH V+ + P G+S NTWRD VVR GA G
Sbjct: 567 LYEVTGVFGFVHYVKSVYSPPDGIS-----PNTWRDCWVVRAPGADG 608
>At2g23070.1 68415.m02750 casein kinase II alpha chain, putative
similar to casein kinase II, alpha chain (CK II) [Zea
mays] SWISS-PROT:P28523; contains protein kinase domain,
Pfam:PF00069
Length = 432
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 478 MRNLSQANSNSDGTFSGSNCNTATRPVDLNEKNEHLERYFRSAEIW 615
+RN S AN+N S S+ + A R + L+ ++L R+ SA ++
Sbjct: 14 LRNASAANNNLFSLLSFSSSSPAKRNLLLSSLQDNLRRFASSASLY 59
>At5g18410.2 68418.m02167 expressed protein similar to p53 inducible
protein [Homo sapiens] GI:5616320
Length = 1017
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -2
Query: 650 KNNPLDPQFRSLHIS--ALRKYLSKCSFFSFRSTGRVAVL----QLLPLNVPSELEFACD 489
KN+P+ P F LH+S A+ K LS F F S R+ L +L PLN L D
Sbjct: 308 KNDPVIPAFPDLHLSPAAILKELS-VYFQKFSSQTRLLTLPAPHELPPLNHIGALRAEHD 366
Query: 488 KFRI 477
F I
Sbjct: 367 DFTI 370
>At5g18410.1 68418.m02166 expressed protein similar to p53 inducible
protein [Homo sapiens] GI:5616320
Length = 1234
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -2
Query: 650 KNNPLDPQFRSLHIS--ALRKYLSKCSFFSFRSTGRVAVL----QLLPLNVPSELEFACD 489
KN+P+ P F LH+S A+ K LS F F S R+ L +L PLN L D
Sbjct: 308 KNDPVIPAFPDLHLSPAAILKELS-VYFQKFSSQTRLLTLPAPHELPPLNHIGALRAEHD 366
Query: 488 KFRI 477
F I
Sbjct: 367 DFTI 370
>At5g12180.1 68418.m01429 calcium-dependent protein kinase, putative
/ CDPK, putative
Length = 528
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 397 NSSRASTFSHGLDNISLMSMNFSHYELMRNLSQANSNSDGTFSGSNCNTATRPVDLNEKN 576
+SS T ++ S YE+ + + A+++ +GT AT ++ ++
Sbjct: 389 DSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDRE 448
Query: 577 EHLERYFR 600
EHL F+
Sbjct: 449 EHLYSAFQ 456
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,558,429
Number of Sequences: 28952
Number of extensions: 334544
Number of successful extensions: 775
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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