Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a14
         (761 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9EXA5 Cluster: Cytosine-specific methyltransferase; n=...    38   0.36 
UniRef50_A1VPH8 Cluster: Phage tail tape measure protein, TP901 ...    36   1.1  
UniRef50_UPI00006CC2DB Cluster: hypothetical protein TTHERM_0066...    35   1.9  
UniRef50_Q4XJK9 Cluster: Putative uncharacterized protein; n=2; ...    35   1.9  
UniRef50_A7REN9 Cluster: Predicted protein; n=2; Nematostella ve...    35   2.5  
UniRef50_UPI00006CFEE2 Cluster: hypothetical protein TTHERM_0071...    34   4.4  
UniRef50_Q04751 Cluster: Histone-specific N-acetyltransferase NA...    33   5.8  
UniRef50_Q5WKV6 Cluster: Methyl-accepting chemotaxis protein; n=...    33   7.7  
UniRef50_Q9LKA7 Cluster: Gb|AAC80581.1; n=2; Arabidopsis thalian...    33   7.7  
UniRef50_A7T202 Cluster: Predicted protein; n=2; Nematostella ve...    33   7.7  
UniRef50_A2EPD0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  
UniRef50_A6SRS0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q9EXA5 Cluster: Cytosine-specific methyltransferase; n=3;
           Proteobacteria|Rep: Cytosine-specific methyltransferase
           - Neisseria meningitidis
          Length = 862

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +3

Query: 432 LLAKKYSVEQPAFADELDSIDANNLKCTSYKLNKLNNDRLLFSDILIATYLGLSLLENWK 611
           LLAKKY+ ++    D +D ID+N+L   S  L KLN       +I+   +L  +L EN+ 
Sbjct: 512 LLAKKYADKEKVIFDLVD-IDSNSLNLLSLLLKKLNLGSKFEFNIIHQDFLTATLPENYD 570

Query: 612 -VLTDRNNGLISIERNRLNLIEEEAKNR 692
            V+ +   G +      L L  + A N+
Sbjct: 571 LVIGNPPYGKVKASDKNLALYRKNATNK 598


>UniRef50_A1VPH8 Cluster: Phage tail tape measure protein, TP901
           family; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Phage tail tape measure protein, TP901 family -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 914

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +3

Query: 522 KLNKLNNDRLLFSDILIATYLG--LSLLENWKVLTDRNNGLISIERNRLNLIEEEAKNRK 695
           K N+   DRL     L A Y    LSLLE    L +R N L   ER RLN+ +E      
Sbjct: 737 KANEDAMDRLNMKYTLSANYTERQLSLLEKENALVERRNAL---ERERLNIDKEGYSLNT 793

Query: 696 *SSRTNEAVQTATQSHQ 746
              R N AV++A   +Q
Sbjct: 794 AGQRVNVAVESAASIYQ 810


>UniRef50_UPI00006CC2DB Cluster: hypothetical protein
           TTHERM_00663870; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00663870 - Tetrahymena
           thermophila SB210
          Length = 163

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +3

Query: 375 LAESNSEMRIQKTLSDM--PILLAKKYSVEQPAFADELDSIDANNLKCTSYKLNKLNNDR 548
           L+ ++ EM+I + +SD+      + KYS++    ++   + +  +++  + KL +  N++
Sbjct: 74  LSNNSQEMQINRQISDLNDDASHSSKYSIQDEQSSELKQNKNIQSIQQNTNKLEQQINNK 133

Query: 549 LLFSDILIATYLGLSLLENWKVLTDRNN 632
             F D LI T   +  L+N  +L D+ N
Sbjct: 134 YNFQDQLIKT---IQTLKNQSILVDQKN 158


>UniRef50_Q4XJK9 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 295

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 24/95 (25%), Positives = 49/95 (51%)
 Frame = +3

Query: 405 QKTLSDMPILLAKKYSVEQPAFADELDSIDANNLKCTSYKLNKLNNDRLLFSDILIATYL 584
           +K +  +  +L KK+SV Q A     + I  NN +  + +LN +    + + D  +   L
Sbjct: 144 EKNVETVENILNKKFSV-QKADIQNFNIITKNN-QIINAELNNVYKGNMEYLDKNVVL-L 200

Query: 585 GLSLLENWKVLTDRNNGLISIERNRLNLIEEEAKN 689
           GL  L + K++ D  NG++ +E   +++  + ++N
Sbjct: 201 GLDFLRDKKLIFDLKNGVLYLEGKSMHMSTDNSEN 235


>UniRef50_A7REN9 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 522

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
 Frame = +3

Query: 150 YDNFGNMSLHSTSRHFIPPAFGIEGYARIGNPLTNPSVVEIKPKTTAGQNKYCLKYLYSE 329
           YD+ G M      + F+P   G++ Y+  G     P +++I  K T G+ K C+K    E
Sbjct: 411 YDDIGEMFAEQPRQDFLPLIDGLKEYS--GMLSQYPEILQIH-KGTIGKVKECIKLKEDE 467

Query: 330 LFATAIEDAII--AYRILAESNSEMR--IQKTLSDMPILLAKKYSVEQPAF 470
                I D +   A  I A S +EM    Q  ++D  +++ + +  EQ AF
Sbjct: 468 KMEVRIVDTVSSRADTITAVSFAEMNHFHQLRVADFKVMM-QSFLQEQIAF 517


>UniRef50_UPI00006CFEE2 Cluster: hypothetical protein
           TTHERM_00715680; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00715680 - Tetrahymena
           thermophila SB210
          Length = 2075

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 369 RILAESNSEMRIQKTLSDMPILLAKKYSVEQPAFADEL--DSIDANNLKCTSYKLNKLNN 542
           +I    NS+MR Q   ++   +  K YS+ Q    + L  +S  +NN K +  KLN  NN
Sbjct: 352 KIQQSQNSQMRFQNNTNNQAPVKQKSYSLYQANNQETLGFNSFSSNNNKQSKNKLNNANN 411

Query: 543 D 545
           +
Sbjct: 412 E 412


>UniRef50_Q04751 Cluster: Histone-specific N-acetyltransferase NAT4;
           n=2; Saccharomyces cerevisiae|Rep: Histone-specific
           N-acetyltransferase NAT4 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 285

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +3

Query: 474 DELDSIDA-NNLKCTSYKLNKLNNDRLLFSDI-LIATYLG 587
           D+ DSID+ ++LKC +YKL+K   D++L + + LI  +LG
Sbjct: 74  DDTDSIDSVDSLKCINYKLHKSRGDQVLDACVQLIDKHLG 113


>UniRef50_Q5WKV6 Cluster: Methyl-accepting chemotaxis protein; n=1;
           Bacillus clausii KSM-K16|Rep: Methyl-accepting
           chemotaxis protein - Bacillus clausii (strain KSM-K16)
          Length = 578

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
 Frame = +3

Query: 336 ATAIEDAIIAYRILAESNSEM-RIQKTLSDMPILLAKKYSVEQPAFADELDSIDANNLKC 512
           A AI D  I+Y  L ESN E+ R+ ++ + M   L K  +  Q +  + LD   A++L  
Sbjct: 233 AAAIADGDISYSNLPESNDEIGRLGRSFNTMTTQLKKLVADLQQSGINVLDR--ASDLSA 290

Query: 513 TSYKLNKLNNDRLL-FSDILIATY-LGLSLLENWKVLTDRNNGLISIERNRLNLIEEEAK 686
            + + +    + LL  ++I   T    + L +  + + + N  + SI   +  ++E   +
Sbjct: 291 VAEETSATAQEMLLAVNEIGSGTQDQAIQLEKANEQVGELNQSIQSINEQKQKVVETSVE 350

Query: 687 NRK*SSRTNEAVQTATQSH 743
           +   S++  E V    QSH
Sbjct: 351 SSIASAKGREMVSHLEQSH 369


>UniRef50_Q9LKA7 Cluster: Gb|AAC80581.1; n=2; Arabidopsis
           thaliana|Rep: Gb|AAC80581.1 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 1145

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 20/66 (30%), Positives = 37/66 (56%)
 Frame = +3

Query: 357 IIAYRILAESNSEMRIQKTLSDMPILLAKKYSVEQPAFADELDSIDANNLKCTSYKLNKL 536
           I+A +++AE   E  ++K L       +KK S  +PA  D+ DS+D+N+L    ++  ++
Sbjct: 458 IVASKLIAEDMHESVMRKNLHRR----SKKISDIKPASLDQHDSLDSNSLNSFEFQDKEM 513

Query: 537 NNDRLL 554
            N  L+
Sbjct: 514 GNIHLV 519


>UniRef50_A7T202 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 585

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +3

Query: 435 LAKKYSVEQPAFADELDSIDANNLKCTSYKLNKLNNDRLLFSDI 566
           L K Y ++ P +++E+ +I+  NLK  SY + K ++ R    D+
Sbjct: 184 LVKNYVIKNPEYSNEITNIETENLKQRSYLVGKRSHCRKTRHDV 227


>UniRef50_A2EPD0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 963

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 7/183 (3%)
 Frame = +3

Query: 162 GNMSLHSTSRHFIPPAFGIEGYARIGNPLTNPSVVEIKPKTTAGQNK------YCL-KYL 320
           GNMS +      I  +  +E      N   N   V+I  K T   NK       CL K +
Sbjct: 351 GNMSQYDID---IKSSNNLERLLARANSKNNEEFVKISQKVTEKLNKEGLDLLICLDKMI 407

Query: 321 YSELFATAIEDAIIAYRILAESNSEMRIQKTLSDMPILLAKKYSVEQPAFADELDSIDAN 500
            S L +    D +    I     S++ ++KT  +    LA  Y + +     +L SID  
Sbjct: 408 NSSLLSHDSIDNLRFLFITISDVSKINLEKTDKNFGFSLASSYHISR--LVSKL-SIDDI 464

Query: 501 NLKCTSYKLNKLNNDRLLFSDILIATYLGLSLLENWKVLTDRNNGLISIERNRLNLIEEE 680
           N   +  KL+++      F   +  +    S  E  K+  + N   + + +++LNL E+E
Sbjct: 465 NEVISKQKLSEIFWILSPFHLYVPKSVYSKSKEEIDKLTDETNKDFMPLLKSKLNLAEDE 524

Query: 681 AKN 689
            KN
Sbjct: 525 QKN 527


>UniRef50_A6SRS0 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1059

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +3

Query: 216  IEGYARIGNPLTNPSVVEIKPKTTAGQNKYCLKYLYSELFATAIEDAIIAYRILAES--N 389
            IE Y  + +P +  ++  +   T   Q K  L+ +  EL+++ IE   I+   L E+   
Sbjct: 761  IESYVELSHPASKKAMAVLVDATKNEQVKQKLQEMAMELYSSEIESKYISVLDLLEAFPG 820

Query: 390  SEMRIQKTLSDMPILLAKKYSV 455
             E+ +   L+ +P L  ++YS+
Sbjct: 821  IELSLNSFLALLPPLKLRQYSI 842


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,084,580
Number of Sequences: 1657284
Number of extensions: 11314415
Number of successful extensions: 26855
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26843
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)