Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a14
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.87 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.87 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.87 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.87 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.87 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.5  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 63  VNYDIK*RRKTLYY*FVLSV 4
           V + IK RR+TLYY F L V
Sbjct: 201 VTFTIKIRRRTLYYFFNLIV 220


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 63  VNYDIK*RRKTLYY*FVLSV 4
           V + IK RR+TLYY F L V
Sbjct: 201 VTFTIKIRRRTLYYFFNLIV 220


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 63  VNYDIK*RRKTLYY*FVLSV 4
           V + IK RR+TLYY F L V
Sbjct: 201 VTFTIKIRRRTLYYFFNLIV 220


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 63  VNYDIK*RRKTLYY*FVLSV 4
           V + IK RR+TLYY F L V
Sbjct: 201 VTFTIKIRRRTLYYFFNLIV 220


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 63  VNYDIK*RRKTLYY*FVLSV 4
           V + IK RR+TLYY F L V
Sbjct: 201 VTFTIKIRRRTLYYFFNLIV 220


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +3

Query: 537 NNDRLLFSDILIATYLGLSLLENWKVLTDRNNGLISIERNRLNLIEEEAKN 689
           +N + +   +  A  L L+ +  W + TD  NGL   +   LN I    K+
Sbjct: 338 DNPKSIAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTKYQILNAINAALKS 388


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +1

Query: 208 RSELKATQESETHLRIQVW*RSNQKRQPVKINIA*NIFIQSYL---LPPL 348
           R EL A +   T  RIQVW  + + R   +I  A    ++SY     PPL
Sbjct: 250 REEL-AQRTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPERYPPL 298


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 201 PPAFGIEGYARIGNPLTNPSVVEI 272
           PP   + GYA +   L + +V  I
Sbjct: 375 PPIMNLNGYANVNRKLISSTVTSI 398


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 201 PPAFGIEGYARIGNPLTNPSVVEI 272
           PP   + GYA +   L + +V  I
Sbjct: 375 PPIMNLNGYANVNRKLISSTVTSI 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,859
Number of Sequences: 336
Number of extensions: 2988
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)