Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a13
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0473 - 3478660-3480338,3480507-3480609 31 1.00
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 31 1.3
05_06_0206 + 26369089-26369143,26369627-26369733,26369814-263706... 29 4.0
10_06_0140 + 11147019-11147791,11148301-11150524 29 5.3
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 29 5.3
07_01_0154 - 1094256-1094672,1094954-1094977,1095867-1095891,109... 28 9.3
06_01_0159 + 1193479-1194435,1194509-1194652,1194735-1194821,119... 28 9.3
06_01_0158 - 1186903-1187013,1187108-1187197,1187504-1187590,118... 28 9.3
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 28 9.3
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410... 28 9.3
01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-70... 28 9.3
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 31.1 bits (67), Expect = 1.00
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 463 KHERICKYTH-HYKSLKYMLNDQ-SRLKQDISFRKDSIFNIEVNHRNEVKTYELALKKYK 636
K E K +H SL+ L Q + +I K + ++ + ++ T E + K +
Sbjct: 221 KLEEKLKDSHSEISSLQKELEGQLAHHDHEIEKCKKELEHVHEKYSHDKSTLETEIIKLQ 280
Query: 637 DVVKNFDTFIAKDYQKSMAYLSQCDEI 717
D+VKNF+ +AK Q+ + +Q E+
Sbjct: 281 DIVKNFEGDLAKMSQEKLQLKAQVKEL 307
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +1
Query: 487 THHYKSLKYMLNDQSRLKQDISFRKDSIFNIE---VNHRNEVKTYELALKKYKDVVKNFD 657
T + +K ML R KQDI + DS+ +E N N+ K E K ++ VK +
Sbjct: 705 TAELQKVKQMLE---RAKQDIRLKDDSLRKLEDNCQNLENKAKGKEQFYKNLQEKVKELE 761
Query: 658 TFIAKDYQKSMAYLSQCDEIARKVNEK 738
+ + + Q +E+ K+ EK
Sbjct: 762 SQLDSKMHSQITSEKQQNELFGKLKEK 788
>05_06_0206 +
26369089-26369143,26369627-26369733,26369814-26370647,
26370781-26370939,26371070-26371410,26373894-26373991,
26374244-26374350,26374715-26375266,26375366-26375524,
26375631-26376005
Length = 928
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +1
Query: 478 CKYTHHYKSLKYMLNDQSRLKQDISFRKDSIFNIEVNHRNEVKTYELALKKYKDVVKNFD 657
C+ Y+ K M N + L +DI + S+ ++ R ++ L+ ++
Sbjct: 33 CQQEDDYEGAKTMTNPWTFLPEDIWYHIHSLLPLKDAARTACVSHTF-LRSWR----YRP 87
Query: 658 TFIAKDYQKSMAYLSQCDEIARKVNEKV 741
+ D + ++ LS+ DE+ +++NEKV
Sbjct: 88 NLVFSDAKLGLSGLSESDEVTKELNEKV 115
>10_06_0140 + 11147019-11147791,11148301-11150524
Length = 998
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 141 KESEKREEEHAKKICKFKALKFYVEEMCFTRNSTIKCSTFKKNRYIITLQV 293
+E ++ E+EH KKICK LK+ + R T+ K +++ TL +
Sbjct: 560 EECDELEDEHLKKICKRLLLKY----LSLGRGITVLPKEIAKLKFLETLDL 606
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 28.7 bits (61), Expect = 5.3
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 7/178 (3%)
Frame = +1
Query: 46 HDSN*IVMSTKSQHSVRIEIPKSRKIFVKLFERSLKREKKNMQKKYVSLKHSNSMSRKCA 225
HD + M K +HS ++I K + K + L+++ +K+ ++ + +
Sbjct: 420 HDDDAFRMERKRKHSEEVKIAKEVEAHEKRIRKELEKQDMLNRKREEQVRREMERNDRER 479
Query: 226 LPEIQPLSAAHLKRTDILLPYKYYLKKQEHEKRRENF---NSNIFEKYKNL-SIDLKKRC 393
E + L K + ++ +++ KR E + S EK + + +K
Sbjct: 480 RKEEERLLREKQKEEE-----RFQREQRREHKRMEKYLLKQSLRAEKIRQKEELRKEKEA 534
Query: 394 YVHSPSNEIRTVTDFDKDYFTNIKHER--ICKYTHHYKSLKYMLN-DQSRLKQDISFR 558
+NE T ++Y ++ ER + + K L ML+ D L+Q SFR
Sbjct: 535 ARQKAANERATARRIAREYMELMEDERLELMELVSRSKGLPSMLSLDSDTLQQLDSFR 592
>07_01_0154 -
1094256-1094672,1094954-1094977,1095867-1095891,
1096014-1096304,1096391-1096470,1096953-1097052,
1097143-1097204,1097650-1097750,1097940-1098117,
1098298-1098924,1099014-1099100,1099804-1099905,
1100265-1100348,1100580-1100657
Length = 751
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 418 IRTVTDFDKDYFTNIKHERICKYTHHYKSLKYMLNDQSRLKQDISFRKDSIFNI 579
+ T+ F K +K + IC HH + + L Q + + ++ KDS F++
Sbjct: 204 LHTILKFLKHTDNELKEDFICISAHHILMVDWDLYYQLNVGEPLNLVKDSTFSL 257
>06_01_0159 +
1193479-1194435,1194509-1194652,1194735-1194821,
1194910-1195244,1195600-1195840,1195921-1195995,
1196072-1196157,1196591-1196663,1196805-1197535,
1197613-1197784,1197862-1197948,1198255-1198344,
1198439-1198549
Length = 1062
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 292 YYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRCYVHSPSNEIRT 426
YY +K++ +KR+E S++ N I L KRC + + I+T
Sbjct: 849 YYSRKKKEKKRKEKSRSSL----DNDLIQLGKRCRIATTRTAIKT 889
>06_01_0158 -
1186903-1187013,1187108-1187197,1187504-1187590,
1187668-1187839,1187917-1188647,1188789-1188861,
1189295-1189380,1189455-1189529,1189610-1189643,
1190331-1190622,1191073-1191439
Length = 705
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 292 YYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRCYVHSPSNEIRT 426
YY +K++ +KR+E S++ N I L KRC + + I+T
Sbjct: 492 YYSRKKKEKKRKEKSRSSL----DNDLIQLGKRCRIATTRTAIKT 532
>05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +1
Query: 109 KSRKIFVKLFERSLKREKKNMQKKYVSLKHSNSMSRKCALPEIQPLSAAHL-KRTDILLP 285
K + + + S K + +K L N+M R+ +PE PLSA L +TD +L
Sbjct: 916 KCTHLIAEALDPSGKISSVQVYRKLTQLGLRNAMKRRTKVPE-APLSAQELATQTDQMLG 974
Query: 286 YKYYLKKQEHEKRRENFNSNIFEKYKNLSIDLK 384
K E +RR + Y++ + D K
Sbjct: 975 EHNCDPKPETTRRRRKRQNVSHASYEDNTTDGK 1007
>02_05_0076 +
25637752-25639062,25639221-25639297,25640962-25641095,
25641178-25641242,25641431-25641482,25641912-25641994,
25642128-25642221,25642332-25642861
Length = 781
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 111 LWYFNSNRMLTFSTHHDSITIVQF--VNVKYKIANN 10
LW+ +S L +H D +T +QF VN KY I+ +
Sbjct: 490 LWHVSSTYCLKTFSHSDYVTCIQFNPVNDKYFISGS 525
>01_01_0089 -
699533-699643,699738-700046,700134-700220,700298-700469,
700547-701373,701487-701559,701993-702078,702153-702227,
702308-702548,702905-703239,703328-703414,703497-703640,
703714-704670
Length = 1167
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 292 YYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRCYVHSPSNEIRT 426
YY +K++ +KR+E S++ N I L KRC + + I+T
Sbjct: 861 YYSRKKKEKKRKEKSRSSL----DNDLIQLGKRCRIATTRTAIKT 901
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,964,047
Number of Sequences: 37544
Number of extensions: 260630
Number of successful extensions: 705
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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