Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a13
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    29   0.036
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    27   0.25 
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    27   0.25 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.58 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.77 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    24   1.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   7.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.5  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 29.5 bits (63), Expect = 0.036
 Identities = 18/78 (23%), Positives = 35/78 (44%)
 Frame = +1

Query: 289 KYYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRCYVHSPSNEIRTVTDFDKDYFTNIKH 468
           K Y + +E E++    N N + KY+  S +  +       S E + ++    +Y +NI +
Sbjct: 275 KRYSRSREREQKSYK-NENSYRKYRETSKERSRDKTERERSKERKIISSLSNNYISNISN 333

Query: 469 ERICKYTHHYKSLKYMLN 522
                  ++ K L Y +N
Sbjct: 334 YN--NNNNYNKKLYYNIN 349


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
 Frame = +1

Query: 97  IEIPKSRKIFVKLFERSLKREKKNMQ-KKYVSLKHSNSMSRKCALPEIQPLSAAHLKRTD 273
           +E   SRK + +  ER  K  K   + +KY       S  R       +P   + L    
Sbjct: 30  LEERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNY 89

Query: 274 ILLPYKYYLKKQEHEKRRENFNSNIFEKYKNLSIDLKK 387
               Y  Y     +     N+N+N  + YKN  I++++
Sbjct: 90  KYSNYNNY-NNNYNNNYNNNYNNNYKKLYKNYIINIEQ 126


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
 Frame = +1

Query: 97  IEIPKSRKIFVKLFERSLKREKKNMQ-KKYVSLKHSNSMSRKCALPEIQPLSAAHLKRTD 273
           +E   SRK + +  ER  K  K   + +KY       S  R       +P   + L    
Sbjct: 30  LEERTSRKRYSRSREREQKSYKNEREYRKYRETSKERSQDRTERETSKEPKIISSLSNNY 89

Query: 274 ILLPYKYYLKKQEHEKRRENFNSNIFEKYKNLSIDLKK 387
               Y  Y     +     N+N+N  + YKN  I++++
Sbjct: 90  KYSNYNNY-NNNYNNNYNNNYNNNYKKLYKNYIINIEQ 126


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 1/139 (0%)
 Frame = +1

Query: 46  HDSN*IVMSTKSQHSVRIEIPKSRKIFVKLFERSLKREKKNMQKKYVSLKHSNSMSRKCA 225
           H  + IV +     +VR +    R I +KL  R+   E     ++  +L ++N MS +  
Sbjct: 53  HGKSTIVKAISGVQTVRFKNELERNITIKLDTRA---EDSTRGEQEANLGYTNKMSTRGK 109

Query: 226 LPEIQPLSAAHLKRTDILLPYKYYLKKQEHEKRREN-FNSNIFEKYKNLSIDLKKRCYVH 402
               +P S  +++      P K+    Q+    +EN +N N F    N S          
Sbjct: 110 ----RPASPGYVQP-----PTKHQKLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVLFK 160

Query: 403 SPSNEIRTVTDFDKDYFTN 459
               E +T+   + DY  N
Sbjct: 161 QNKEEEQTINRKNSDYLDN 179


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 125 KIFLDFGISILTEC*LLVLITIQLLSCNL 39
           KI  D  ++  TE   LV +++QLLSC +
Sbjct: 167 KIPHDIAVNTTTEKGALVTLSVQLLSCEV 195


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 706 CDEIARKVNEKVPELXN 756
           CD I +K+ E +PE+ N
Sbjct: 46  CDVIGKKIKELLPEVLN 62


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +1

Query: 7   SIICYFIFYINKLHDSN*IVMSTKSQHSVR-IEIPKSRKIFVKLFERSLKREKKNMQKKY 183
           ++ C    ++ K  DS  +V+S  + H    I + K     +    +      K M K+Y
Sbjct: 387 TVTCQEAMHMLKNADSQLLVISDDNIHIKGVISLNKLTSYVISGIVKCTDFVDKAMVKQY 446

Query: 184 VSLKHSNSMSRKCALPEIQP 243
           V +KHS ++     + E +P
Sbjct: 447 VKVKHSATLGYISRVLEKEP 466


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 210 VEEMCFTRNSTIKCSTFKKNRYIITLQVLFKEARTRKT 323
           +E +C+T++  I CST   N     L+   KE   R+T
Sbjct: 208 LEALCWTQDEDIICSTPIGNLSHALLKDPVKEFWERRT 245


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 316 EKRRENFNSNIFEKYKN 366
           +K   +F  +I+EKYKN
Sbjct: 53  KKSTAHFVKDIYEKYKN 69


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 210 VEEMCFTRNSTIKCSTFKKNRYIITLQVLFKEARTRKT 323
           +E +C+T++  + CST   N     L+   KE   R+T
Sbjct: 155 LEALCWTQDEDVICSTPIGNLSHALLKDPVKEFWERRT 192


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 328 HGVFRVLASLNN 293
           H VFR L SLNN
Sbjct: 408 HKVFRTLNSLNN 419


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,392
Number of Sequences: 438
Number of extensions: 3561
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)