Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a12
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q231C7 Cluster: TPR Domain containing protein; n=1; Tet...    34   2.8  
UniRef50_A6LQ52 Cluster: Methyl-accepting chemotaxis sensory tra...    33   3.7  
UniRef50_A6PA44 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_A6M0H8 Cluster: rRNA (Guanine-N(1)-)-methyltransferase;...    33   4.9  
UniRef50_Q23J57 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q22TR9 Cluster: Putative uncharacterized protein; n=2; ...    33   4.9  
UniRef50_A1ANN3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q4YBX7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_A2R3W0 Cluster: Contig An14c0180, complete genome; n=1;...    33   6.4  
UniRef50_A2QWF9 Cluster: Remark: Niemann-Pick C precursor; n=16;...    33   6.4  
UniRef50_UPI00006CB6D6 Cluster: Leucine Rich Repeat family prote...    32   8.5  
UniRef50_UPI000049831B Cluster: SNF2 family protein; n=1; Entamo...    32   8.5  
UniRef50_Q4UIN5 Cluster: Cysteine repeat modular protein 2 homol...    32   8.5  
UniRef50_UPI000069EF61 Cluster: UPI000069EF61 related cluster; n...    26   9.2  

>UniRef50_Q231C7 Cluster: TPR Domain containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: TPR Domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1662

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 21   LGDDKKMI*YQQQCIYIAKHSYYTATKDVLNK--QKLSFSYHFLAISKMSTKYHKNCTK 191
            LGD+KK + Y  +C+ I K  Y       + K  QK+   Y  L  +K+  KY +  T+
Sbjct: 1601 LGDNKKALDYMLECLQIQKQIYKNNNHPSIFKSLQKICQYYQILGDAKLYEKYQQEITQ 1659


>UniRef50_A6LQ52 Cluster: Methyl-accepting chemotaxis sensory
           transducer precursor; n=1; Clostridium beijerinckii
           NCIMB 8052|Rep: Methyl-accepting chemotaxis sensory
           transducer precursor - Clostridium beijerinckii NCIMB
           8052
          Length = 825

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
 Frame = +3

Query: 141 FLAISKMSTKYHKNCTKDPN-----ELEDPTRKQPDEQLT---RKLKPLTTKPLCDCSNC 296
           F+A+S +  ++     K+ N     E+      + D+Q+    R L+ + + P+    N 
Sbjct: 24  FIALSGIGYRFASKSLKESNLNVMEEMTKTAASRADDQIKSEIRNLEVIASNPIITDKNV 83

Query: 297 TCKDCPDVLKTFSINVTEDSCDFGTKKVEQIDESSHEVSIKDCQSLLDVLNNTRNCTCEI 476
             ++   +LK     V +       K    ID   ++ SIK  QS +  +N   + T   
Sbjct: 84  QIEEKIQILKPALKTVGQLEMSISDKDGNSIDTLGNKKSIKTTQSFMKSINGENSITNPY 143

Query: 477 IAKVVRSNV 503
           I  V +  V
Sbjct: 144 IDPVTKKKV 152


>UniRef50_A6PA44 Cluster: Putative uncharacterized protein; n=1;
           Shewanella sediminis HAW-EB3|Rep: Putative
           uncharacterized protein - Shewanella sediminis HAW-EB3
          Length = 414

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +3

Query: 108 LNKQKLSFSYHFLAISKMSTKYHKNCTKDPNELEDPTRK-QPDEQLTRKLKPLTTKPLCD 284
           L  +  S S     + +   ++ +   +    + D T+K +  EQ TR L+    + L  
Sbjct: 234 LRNELASTSSSVEILDRQKVQWQQKLRQSEENILDLTQKLRQREQETRALEGFVKQSLSP 293

Query: 285 CSNCT---CKDCPDV 320
           C+ C+   C+DCPD+
Sbjct: 294 CNGCSADSCRDCPDL 308


>UniRef50_A6M0H8 Cluster: rRNA (Guanine-N(1)-)-methyltransferase;
           n=1; Clostridium beijerinckii NCIMB 8052|Rep: rRNA
           (Guanine-N(1)-)-methyltransferase - Clostridium
           beijerinckii NCIMB 8052
          Length = 286

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 84  YYTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKD 194
           Y T  KD +NK+ +  +Y+ L +SK + KY     KD
Sbjct: 111 YLTNLKDYMNKKNIEANYYGLDVSKEAVKYASKLNKD 147


>UniRef50_Q23J57 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 992

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
 Frame = +3

Query: 318 VLKTFSINVTED-SCDFGT----KKVEQIDESS--HEVSIKDCQSLLDVLNNTRNCTC 470
           +L++ S+NVT + + DFGT    +K++ I  SS  H V    CQ+ ++V+NN +N  C
Sbjct: 528 LLQSQSVNVTSNFTLDFGTISPEEKLQCIQRSSSGHWVH-SSCQTHIEVINNKKNIKC 584


>UniRef50_Q22TR9 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1349

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = +3

Query: 75  KHSYYTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKL 254
           K +     K+  N  K+S     L + K++ + H  C K PN+  +    Q ++ LT+  
Sbjct: 43  KENQINYLKNNQNTLKISLPTQILQMDKITIQ-HLKCNKHPNK--NLQFIQVNDVLTQ-- 97

Query: 255 KPLTTKPLCDCSNC 296
            P++TKPL  CS+C
Sbjct: 98  -PISTKPLFYCSSC 110


>UniRef50_A1ANN3 Cluster: Putative uncharacterized protein; n=1;
           Pelobacter propionicus DSM 2379|Rep: Putative
           uncharacterized protein - Pelobacter propionicus (strain
           DSM 2379)
          Length = 381

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +3

Query: 150 ISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLKPLTTKPLCDCSNCTCKDCPDVLK 326
           +SK+   Y K     PN     ++ + D QL   +  L  KP+CD    +C  C D+L+
Sbjct: 106 LSKLIDMYTKE--HSPN-WTPKSQHEIDRQLELLMMVLDNKPVCDIDRASCVSCRDILR 161


>UniRef50_Q4YBX7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium berghei|Rep: Putative uncharacterized protein
            - Plasmodium berghei
          Length = 764

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 4/170 (2%)
 Frame = +3

Query: 78   HSYYTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLK 257
            ++ +   K +LNKQK      F   + MS K  K  +K      +PT KQP +    K K
Sbjct: 553  YNLFQKKKSILNKQKSMIETQFKKQNTMSLKRKKTLSK-----LNPT-KQPYKIFLNKKK 606

Query: 258  PL-TTKPLCDCSNCTCKDC-PDVLKTFSINVTEDSCDFGTKKVEQIDESSHEVSIKDCQS 431
             + T K L    N   K+  P+  K  S + T+   D  TK  +++D      +I +   
Sbjct: 607  VICTQKSLHGLDNKKNKNLEPNSKKMLSRSKTKVYVDNDTKVFKKVDVKMVSKNIFNPNL 666

Query: 432  LLDVLNN--TRNCTCEIIAKVVRSNVYIHRGKHKVSDIIDETNVANVSIK 575
             ++  NN  T N   +        N  +    +KV  I  +TN     +K
Sbjct: 667  SIESYNNNETDNKKGDTAVSQNTLNDELDNNLNKVDSISLDTNSIRNKVK 716


>UniRef50_A2R3W0 Cluster: Contig An14c0180, complete genome; n=1;
           Aspergillus niger|Rep: Contig An14c0180, complete genome
           - Aspergillus niger
          Length = 557

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 23/89 (25%), Positives = 35/89 (39%)
 Frame = +3

Query: 150 ISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLKPLTTKPLCDCSNCTCKDCPDVLKT 329
           I  +  ++ + C K+  +     RK  D    +KL+   T+P   CS C     P V   
Sbjct: 10  IVDLRDRHRRRCIKNIGQERQSKRKSCDACAQKKLRCSMTRP--SCSRCIQSRRPCVYPQ 67

Query: 330 FSINVTEDSCDFGTKKVEQIDESSHEVSI 416
            SI V   + D     +     S H VS+
Sbjct: 68  SSIPVQAPNLDDAQDNIVTSSGSLHSVSV 96


>UniRef50_A2QWF9 Cluster: Remark: Niemann-Pick C precursor; n=16;
           Pezizomycotina|Rep: Remark: Niemann-Pick C precursor -
           Aspergillus niger
          Length = 1277

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 14/53 (26%), Positives = 20/53 (37%)
 Frame = +3

Query: 210 DPTRKQPDEQLTRKLKPLTTKPLCDCSNCTCKDCPDVLKTFSINVTEDSCDFG 368
           +P    P+      +KP       +   C+C DCPDV        T+  C  G
Sbjct: 215 EPAGSDPEGMKALPIKPKACNDADEAFRCSCVDCPDVCPELPAIETDKYCHVG 267


>UniRef50_UPI00006CB6D6 Cluster: Leucine Rich Repeat family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
           Repeat family protein - Tetrahymena thermophila SB210
          Length = 982

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +3

Query: 348 EDSCDFGTKKVEQIDESSHEVSIKDCQSLLDVLNNTRNCTCEIIAKVVRSN 500
           E+  DF  +K+E++D S++ +  K CQ++L +        C  + +++  N
Sbjct: 809 ENIIDFNLQKLEELDCSTNSICAKSCQTILMMPQMQTEIKCPKLFQIILQN 859


>UniRef50_UPI000049831B Cluster: SNF2 family protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: SNF2 family protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 858

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 390 DESSHEVSIKDCQSLLDVLNNTRNCTCEIIAKVVRSNVYIHRGKHKVSDI 539
           ++   ++S KD QS LD+       TCE I K VR ++ +  GK +  D+
Sbjct: 283 EKKEMKISFKDYQSALDICRKRPLLTCEPITKCVR-DLLVLDGKEEQGDL 331


>UniRef50_Q4UIN5 Cluster: Cysteine repeat modular protein 2
           homologue, putative; n=2; Theileria|Rep: Cysteine repeat
           modular protein 2 homologue, putative - Theileria
           annulata
          Length = 2501

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 30/104 (28%), Positives = 42/104 (40%)
 Frame = +3

Query: 87  YTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKLKPLT 266
           Y  TK V  + K    Y    I K   K  +   K+ N++   + KQ    L  K K   
Sbjct: 4   YIYTKCVCVEWKTKRDYFTEEILKRFKKAEQIRFKNRNQIYTKSLKQYLADLNCKSKNPG 63

Query: 267 TKPLCDCSNCTCKDCPDVLKTFSINVTEDSCDFGTKKVEQIDES 398
           ++  C   N T  DC  + KTFS N   +SC +    +  I  S
Sbjct: 64  SRARC---NETTTDCKCIKKTFSANSLANSCIYEDDLINCIGSS 104


>UniRef50_UPI000069EF61 Cluster: UPI000069EF61 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069EF61 UniRef100 entry -
           Xenopus tropicalis
          Length = 530

 Score = 25.8 bits (54), Expect(2) = 9.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 222 KQPDEQLTRKLKPLTTKPLCDCSNCTCKDCPDVLKTFSINVTED 353
           K+  + L +KLK +   P  DC N  C D P  +    I++  D
Sbjct: 371 KEGYKGLGQKLKSMLISP-ADCKNLECLDEPQEILKILIDLLND 413



 Score = 25.0 bits (52), Expect(2) = 9.2
 Identities = 16/64 (25%), Positives = 24/64 (37%)
 Frame = +3

Query: 348 EDSCDFGTKKVEQIDESSHEVSIKDCQSLLDVLNNTRNCTCEIIAKVVRSNVYIHRGKHK 527
           E+  D  T    + D   H  S +  Q+  D    T +CTC        SN+ +   K  
Sbjct: 433 EEKADPATSPKSETDGDLHAESSQ--QNSSDTRLTTDHCTCPTYGDSSESNISLEESKRI 490

Query: 528 VSDI 539
           V  +
Sbjct: 491 VETV 494


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,810,260
Number of Sequences: 1657284
Number of extensions: 9238192
Number of successful extensions: 27606
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 26420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27576
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)