Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a12
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.35 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.61 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.3  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 RKLKPL--TTKPLCDCSNCTCKDCPDVLKTFSINVTEDSCDFGTKKVEQID 392
           RK+KPL  T +PLC   +  C D   + +    N  +D  D   +    ID
Sbjct: 104 RKVKPLLITDEPLCPDGSLACGDGNCIERGLFCNGEKDCSDGSDENTCDID 154


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +3

Query: 372 KKVEQIDESSHEVSIKDCQSLLDVLNNTRNC---TCEIIAKVVRSNVYI 509
           +K+ +++ + HE    D  SLLD + ++      TCE     + +++++
Sbjct: 602 RKLLELERAQHEFKNGDSSSLLDKMRDSSGAGRITCEKCGNKIDTSLFV 650


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = -1

Query: 475 ISHVQFRVLFNTSSKLWQSFMDTSCELSSICSTFFVPKSQESSVTLIEKVF 323
           ++ V   +LF   +K W  F+   C + +  +++  PK     +  +  VF
Sbjct: 93  LTGVMASLLFLNLAKRWPKFVKDWCVVDATFASYGWPKGLNKKLNTLTVVF 143


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/51 (21%), Positives = 23/51 (45%)
 Frame = -1

Query: 475 ISHVQFRVLFNTSSKLWQSFMDTSCELSSICSTFFVPKSQESSVTLIEKVF 323
           ++ V   +LF   +K W  F+   C + +  +++  PK     +  +  VF
Sbjct: 93  LTGVMASLLFLNLAKRWPKFVKDWCVVDATFASYGWPKGLNKKLNTLTVVF 143


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 357 CDFGTKKVEQIDESSHEVSIKDCQSLLDVLNN 452
           CD   +KV+ I    ++   ++ + LLDV+N+
Sbjct: 452 CDLIEQKVKNIQMLVYQNEAEEVKILLDVINH 483


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 87  YTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKDP 197
           +T T D  N+Q+       +   + S++ H+   KDP
Sbjct: 234 FTYTDDGKNQQRTGTELTKMRPKRQSSRRHRKNLKDP 270


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +3

Query: 228 PDEQLTRKLKPLTTKPLCDCSNC 296
           P     R  +  T +  CDC NC
Sbjct: 274 PQVPSPRSQRRYTGRATCDCPNC 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,105
Number of Sequences: 336
Number of extensions: 2961
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)